Brevibacterium casei: I6G59_11625
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Entry
I6G59_11625 CDS
T06973
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
bcau
Brevibacterium casei
Pathway
bcau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6G59_11625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcau03019
]
I6G59_11625
03009 Ribosome biogenesis [BR:
bcau03009
]
I6G59_11625
Enzymes [BR:
bcau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
I6G59_11625
Messenger RNA biogenesis [BR:
bcau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
I6G59_11625
Ribosome biogenesis [BR:
bcau03009
]
Prokaryotic type
rRNA processing factors
I6G59_11625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
DUF5969
Motif
Other DBs
NCBI-ProteinID:
QPS32651
UniProt:
A0A165E846
LinkDB
All DBs
Position
2598127..2601054
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AA seq
975 aa
AA seq
DB search
MIMNDSTNDNGTSDATEGILADLADLQESANAARSADHQVDDKVREELDSLADAAGSLRE
NPDEDGEDSRPRSRRGPKRAREAVANRGLVFEEFVRETDRTGSDGSESDADAEEDAAHAP
ARPQAPAFDPRNPFAAPAAPQPAEPASRPAPAVPQHGGLIFQVPQAELAEVVTVDDDYDD
EDDDLAEDRDSRNDDDRSDDDRSDRDEDSESGGRRRRRGGRGRRSRSRDDDGDARDDAES
EQTEDEDERPSRSKRRGGRAEKSSEREESEKSERSEKAEANEDSPKDRTGDSDDDDEDGG
SRRRRRRRSRSRGSDGDEVTSLKGSTRLEAKRQRRKEGREAGRRRPVITEAEFLARRESV
DRTMLVRESGDQTQLVVVEDGIAVEHYLKENRQQSSLIGNVYLGKVQNVLPSMEAAFIDI
GKGRNAVLYAGEVNWDALGMDGKARRIETALSPGDSVLVQVTKDPVGHKGARLTSQISLP
GRFLVYVPGNSMTGISRKLPDVERARLKKLLKELVGDSNGVIVRTAAEGATDKELSRDVE
RLTKRWETIEKKSKSTKVLAPQLLYSEPDMIVRIIRDVFNEDFNSLVIDGDGAWNTIHEY
VEAVAPDLLDRVHRYSEDDGIFDHYRVEEQIQKALNRTVNLPSGGSLVIDRTEAMTVIDV
NTGKFTGAGGNLEETVTRNNLEAAEEVIRQLRLRDIGGIIVVDFIDMVLESNRDLVVRRL
VECLGRDRTKHQVAEVTSLGLVQMTRKRIGTGLAESMVSAGADLSGRGLLLPGSEEDGSK
AHRGGRSSNSETGGKRDRKRRSSAKSTETETQSDAAANEASRSAVAAIAKATLKKDDETE
ADAQQPSEVSESQPNRSERKSEGRSKSRGRKRSTKSARDAESTNDAKAGSTAEEAQPEPP
TETESESLAQSAPSAAEPEQPAGELPLMIGADTTTKVAVAAEEPAPRRKAPVKKDKPAEA
PQESLPTSFVIIGED
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
gtgatcatgaacgattcgacgaacgacaacggcacatcggatgccactgagggcatcctc
gccgatctcgccgatctgcaggagtccgcgaatgccgcgcgcagcgccgaccaccaggtc
gacgacaaggtgcgcgaagagctcgacagcctcgccgatgcggcaggctccctgcgggag
aaccccgacgaggacggcgaggactcccgcccccgcagccgtcgcggcccgaagcgggcc
cgtgaggcggtggccaaccgcgggctcgtcttcgaggagttcgtccgcgagacggatcgc
accgggtcggacggatccgagtccgacgccgacgccgaggaggacgccgcccatgcaccg
gcccgcccgcaggcgcccgcattcgatccccgcaaccccttcgccgctcccgccgccccg
cagccggccgaacccgcgagccgccctgcccccgccgttccgcagcacggcggcctgatc
ttccaggtgccccaggccgaactcgccgaggtcgtcacggtcgatgacgactacgacgat
gaggacgacgacctcgccgaggaccgggactcgcgcaacgacgacgaccgcagcgacgac
gaccgcagcgaccgggacgaggactccgagtccggcggacggcgccgtcgccgcggcggc
cgcggccgccgctcgcgcagccgcgacgatgacggcgacgcccgtgacgacgctgagtcc
gagcagaccgaggatgaggacgagcgtccctcccggtcgaagcgccgtggcggcagggcg
gagaagagctccgagcgtgaggagtccgagaagtcggagaggtccgagaaggccgaggcg
aatgaggactcgccgaaggacaggaccggcgactccgacgacgatgacgaggacggcggt
tcgcgccgtcgccgccgtcgccgttcccgctcgcgcgggtccgacggcgacgaggtcacc
tcgctcaagggctcgacccgcctcgaggccaagcgtcagcgccgcaaggagggccgtgag
gccggacgccgtcgcccggtcatcaccgaagccgagttcctcgcccgccgcgagtccgtc
gatcgcacgatgctcgtgcgcgagagcggcgaccagacccagctcgtcgtcgtcgaggac
ggcatcgccgtcgagcactatctcaaggagaaccgccagcagtcctcgctcatcggcaac
gtctacctcggcaaggtccagaacgtgctcccgagcatggaggcggcgttcatcgacatc
ggcaagggccgcaacgccgtgctctacgccggtgaggtcaactgggacgccctcggtatg
gacggcaaggcccgtcggatcgagacggcgctcagccccggcgactccgtgctcgtccag
gtgacgaaggatccggtcgggcacaagggtgcccgtctgacgagtcagatctccctgccg
ggacgcttcctcgtctacgtgcccgggaactcgatgaccggcatctcccgcaagctgccc
gacgtcgaacgcgcccgcttgaagaagctgctcaaagagctcgtcggcgactccaacggc
gtcatcgtccgcaccgcagccgaaggcgcgaccgacaaggaactcagccgggacgtcgaa
cgcctgacgaagcggtgggagaccatcgagaagaagtcgaagtcgacgaaggtgctcgcc
ccgcagctgctctacagcgagccggacatgatcgtgcgcatcatccgcgacgtcttcaac
gaggacttcaactcgctcgtcatcgacggcgacggcgcgtggaacaccatccacgagtac
gtcgaagccgtcgcccccgacctcctcgaccgggtccaccggtactccgaggacgatggg
atcttcgaccactaccgggtcgaggagcagatccagaaggcgctcaaccgcaccgtcaac
ctgccctcgggcggttcgctcgtcatcgaccgcaccgaggcgatgacggtcatcgacgtc
aacaccggaaagttcaccggtgccggcggcaaccttgaggagaccgtgacgaggaacaac
ctcgaagccgccgaggaggtcatccgccagctgcgcctgcgcgacatcggcggcatcatc
gtcgtcgacttcatcgacatggtcctcgaatccaatcgcgacctcgtcgtgcgccgtctc
gtcgaatgcctcggtcgcgaccggacgaagcatcaggtcgccgaggtgacctcgctcggt
ctcgtccagatgacgcgcaagcgcatcggcaccggtctggccgagtcgatggtctccgcc
ggtgccgacctcagcggacgcgggctgctcctgcccggttcggaggaggacggttcgaag
gcccaccgcggcggacgatcgtcgaactcggagaccggcggcaagcgcgaccgcaagcgc
cgatcgtcggcgaagtcgaccgagaccgagacgcagtcggatgcggcggccaatgaggcc
tcccgctccgcggtcgccgcgatcgccaaggcgaccctgaagaaggacgacgagaccgag
gcggacgcgcagcagccgtccgaggtctcggagtctcagccgaaccggtccgagcggaag
tccgagggccgatcgaagtcgcggggacggaagcggtcgacgaagtccgcgcgcgacgcc
gagtcgacgaacgacgcgaaggccgggtccacggccgaggaggcccagcccgagccgccg
acggaaaccgagtcggagtcgctcgcacagtctgcaccgtcggcagctgagcccgagcag
ccggcaggagagctgccgctgatgatcggtgccgacaccacgacgaaggtcgcggtggcc
gctgaggagccggcacctcggcgcaaggctccggtgaagaaggacaagcccgccgaggcc
ccgcaggagtccctgccgacctcgttcgtcatcatcggcgaggactga
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