Borreliella carolinensis: QIA18_02540
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Entry
QIA18_02540 CDS
T09353
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
bcaz
Borreliella carolinensis
Pathway
bcaz02020
Two-component system
bcaz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bcaz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
QIA18_02540 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
QIA18_02540 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcaz03021
]
QIA18_02540 (rpoN)
Transcription machinery [BR:
bcaz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QIA18_02540 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
MarR
HTH_36
HTH_11
Motif
Other DBs
NCBI-ProteinID:
WKC90829
LinkDB
All DBs
Position
complement(469287..470546)
Genome browser
AA seq
419 aa
AA seq
DB search
MIKQKLKLSQNLNSIQIQTIKILGLNQKELIKLILKESENNECLEIDSNKIFFETLKTYK
FKKVFYKEDSPIKNQHDIALEKTQTNTSLKEHLLLQLRIQRINEDELKIGEMLINNLNSK
GFHIINPYDLFKKEEKEKVKKIIELIQKFDPIGICVPNIIESLILQAKHHKLETNIIKIL
EKADLLEKTQEKLKEELKIRSKEFNKALEIIRQKLNPNPTLEFKDPNDTNFYVDPDILII
NHNNKFKIKIKEVSVFKKELKKIAENPQKQKKAKWLIESLRYRDEILAKIGIAIYTLQKE
FLRRGFKSLRPMNLSILSEKISVSKSTISRAIKNKYLKCEWGTILIKELFSSVGGAKTNE
FSKLSIKITVKKLLETNKKMSDEAISAILKSKGISISRRTVNKYRNELKSEKGRTYYGT
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgattaaacaaaaattaaaattatcccaaaatttaaactcaattcaaatacaaacaata
aaaatattaggacttaatcaaaaagaattaataaagcttatactaaaagaaagcgaaaac
aacgaatgcctagaaatagactcaaataaaatattttttgaaacattgaaaacatacaag
tttaaaaaagttttttataaagaagatagcccgataaaaaatcaacacgacatagctctt
gaaaaaacgcaaacaaatacttctttaaaagaacaccttttgctacagttaagaattcaa
agaataaatgaagatgaacttaaaataggtgaaatgctaataaacaatctaaacagcaaa
ggttttcatataataaacccttacgatctttttaaaaaggaagaaaaagaaaaagtaaaa
aaaataattgaacttattcaaaaatttgatccaattgggatttgtgtccccaatataata
gaatcgttaattttgcaagcaaagcatcataaattagaaactaatattattaaaattctt
gaaaaagcagaccttcttgaaaaaactcaagaaaagttaaaagaagagctcaaaataaga
agcaaagaatttaacaaagctttagaaattatcagacaaaaacttaaccccaacccaaca
ctcgaatttaaagatccaaacgacactaatttctatgttgatccagatatattaataatt
aatcacaataacaaatttaaaattaaaatcaaagaagttagtgtctttaaaaaagaactt
aaaaagatagctgaaaatccccaaaaacaaaaaaaagcaaagtggttaatcgaatctcta
cgatatagagatgaaatacttgcaaaaataggaatagctatatatacattgcaaaaagaa
tttctaagaagaggttttaaaagtttaagaccaatgaacttgagcattttgtcagaaaaa
attagtgtgtcaaaatcaacaatatcaagagcaataaaaaataaatacttaaaatgcgaa
tggggtacaatattaatcaaagagctttttagctctgttggtggagcaaaaacaaatgaa
ttttcaaaattaagcattaagataacagtaaaaaagttgttagaaacaaataaaaagatg
tcagatgaagcgatttctgctatactgaaatccaaaggaatctctatttctagaagaaca
gtgaacaagtatagaaatgaattgaaatctgagaaagggagaacatattatggaacctaa
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