Buchnera aphidicola BCc: BCc_087
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Entry
BCc_087 CDS
T00423
Symbol
nfo
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
bcc
Buchnera aphidicola BCc
Pathway
bcc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BCc_087 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcc03400
]
BCc_087 (nfo)
Enzymes [BR:
bcc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
BCc_087 (nfo)
DNA repair and recombination proteins [BR:
bcc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BCc_087 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
PRMT5_TIM
Motif
Other DBs
NCBI-ProteinID:
ABJ90564
UniProt:
Q057Y5
LinkDB
All DBs
Position
95902..96774
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AA seq
290 aa
AA seq
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MIKYIGVHCNTSGGLEKSVLQANKLNATAFSFFVKNPLRWNTLPLQQSTIKSFRKFCNKY
NYSTLQILPHSSYLINLGHPDKEKKKKSCKTLIEEINFCNLLGLVMINIHPGSSLKKITE
KKCLENISNSINYILKKTNNIIIVLENTSGQGGNMGYCFEHLAFIINKVRNKSRIGVCLD
TCHLFASGYQLNNKNSFLNIFYRFHELIGLKYLRGIHLNDSKGKFNSKLDRHENLGYGNI
KTSVFSKIVRVIEFNNIPIILETKDASIWKKEIQWLKKQSLLPKISILNF
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
ttgataaagtatataggagttcactgtaatacatctggaggattagaaaaatctgtttta
caagctaataaattaaatgctacagctttttctttttttgtaaaaaatcctttgagatgg
aatactttgccattacaacaaagtacaattaagagttttcgtaagttttgtaataaatat
aattattcaacattacaaatattgcctcatagtagttatttaattaatttaggacatcca
gataaagaaaaaaaaaaaaaatcatgtaaaactttaattgaagaaataaatttttgtaat
ttattaggtttagtgatgataaatattcatccggggagttctttaaaaaaaataacagaa
aaaaaatgtttagaaaatatttcgaattctattaattatatattaaaaaaaactaataat
attattattgttttagaaaatacatccggtcaaggtggaaatatggggtattgttttgaa
catttagcttttattatcaataaagttcgaaacaaatcaagaattggagtatgtcttgat
acatgtcatttatttgcttctggatatcaattaaataataaaaatagttttttaaatatt
ttttatagatttcatgaattaataggattgaaatatttacgtggaattcatttaaatgat
tctaaaggaaaatttaatagtaaattagatcgacatgaaaatttaggttatggaaatatt
aaaacaagtgttttctcaaaaattgtacgagtaattgagtttaacaatattcctataatt
ttagaaacaaaagacgcaagtatttggaaaaaagaaattcaatggttaaaaaaacaatca
ttattacccaaaattagtattttaaatttctaa
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