Buchnera aphidicola BCc: BCc_364
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Entry
BCc_364 CDS
T00423
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
bcc
Buchnera aphidicola BCc
Pathway
bcc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BCc_364 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcc03400
]
BCc_364 (sbcB)
Enzymes [BR:
bcc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
BCc_364 (sbcB)
DNA repair and recombination proteins [BR:
bcc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BCc_364 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BCc_364 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BCc_364 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ABJ90817
UniProt:
Q056Y2
LinkDB
All DBs
Position
complement(387547..388974)
Genome browser
AA seq
475 aa
AA seq
DB search
MCEYFSKKKIIFYDYETFGKNVALDKVSQFCSIETDNKFSYIIKKTILFCYPPIDYLPDP
EAILITKILPQYTYKYGLNEYFLSKKIHDIFSQKNICIIGYNNINFDNLITRNIFYRNLF
DPYEWSWKNNNFSWDILNILRAFYIFLPKSMCWYYNSNGTVSFKLSDITLVNNIKHIHIH
DAYSDVYATFLITKYLFSKYKNFFLYLYMISKKKYISSFLLNNINKPFFYISSFFGSINY
NFGCIMYIGLHPLYKNNIVIFDLSSDFKKIFNLYKKYSTCLISIKKLFNVGIKVVSISKS
PLFFSYNSVSLKHCIRLNIDYLKCQKNFFLLKNNFLIKNWIISCFSYKKKEKINDIDLML
YNNFFLNSDRCLLSFIHKNEPKKWMGWSANFLDNRIKKLFFRLKARNFIKLLNFNEIKKW
QFYCKNKINFIKLEEYFEKIKKFQLKFNKNDKNFILLEDLFKYIKRNINYINNLI
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atttgtgaatatttttcaaaaaaaaaaattatattttatgattatgaaactttcggaaaa
aacgttgctttagataaagtttctcaattttgtagtattgaaacagataataaattttct
tatattataaaaaaaaccattttattttgctacccccctattgattatttacctgatcca
gaagctattttaattacaaaaattttacctcagtatacttataaatatggtttaaatgag
tattttctttctaaaaaaatacatgatattttttcacaaaaaaatatatgtattattgga
tataataatattaattttgataatttaattactcgtaatattttttatagaaatttattt
gatccttatgaatggagttggaaaaataataattttagttgggatatattaaatatttta
cgtgcgttttatatttttttaccaaaatctatgtgttggtattataatagtaatggaaca
gttagttttaaattatctgatattacgttagttaataatatcaaacatattcatattcat
gatgcatattctgatgtatatgcaacttttttaattacaaaatatttattttctaaatat
aaaaatttttttttatatttatatatgatttctaaaaaaaaatatatatcttctttttta
ttgaataatataaataaaccatttttttatatttctagttttttcggatctattaattat
aattttggttgtataatgtatattggtttacatcctttatataagaataatatagttatt
tttgatttatctagtgattttaaaaaaatatttaatttatataaaaaatattctacatgt
ttaatttcaataaaaaaattatttaatgttggtattaaagttgtttcaataagcaaatca
cctctttttttttcttataattcagtttccttgaaacattgtattagattaaatattgat
tatttaaaatgtcaaaaaaatttttttttattaaaaaataattttttaataaaaaattgg
attatatcgtgtttttcatataagaaaaaagaaaaaataaatgatattgatttaatgtta
tataataatttttttttaaattctgatcgttgtttattatcttttattcataaaaatgaa
cctaaaaaatggatgggctggagtgctaattttttagataacagaattaaaaaattattt
tttcgtttaaaagcaagaaattttattaaattattaaattttaatgaaataaaaaaatgg
caattttattgtaaaaataaaattaattttattaaattagaagaatattttgaaaagatt
aaaaaatttcaattaaaatttaataaaaatgataagaattttattctactggaagattta
tttaaatatataaaaagaaatattaattatataaataatttaatttaa
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