Buchnera aphidicola BCc: BCc_385
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Entry
BCc_385 CDS
T00423
Symbol
rho
Name
(GenBank) transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
bcc
Buchnera aphidicola BCc
Pathway
bcc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BCc_385 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcc03021
]
BCc_385 (rho)
03019 Messenger RNA biogenesis [BR:
bcc03019
]
BCc_385 (rho)
Transcription machinery [BR:
bcc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BCc_385 (rho)
Messenger RNA biogenesis [BR:
bcc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BCc_385 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
FtsK_SpoIIIE
AAA
Motif
Other DBs
NCBI-ProteinID:
ABJ90832
UniProt:
Q056W7
LinkDB
All DBs
Position
complement(402206..403468)
Genome browser
AA seq
420 aa
AA seq
DB search
MNLTKLKNTSVSKLIILGEKIGLENLARMRKQDIIFSILKQHSKSGEDIFGDGVLEILQD
GFGFLRSSDSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNKVN
YDQPENARSKILFENLTPLHANSRLQMERGNGSKEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVNGEVVASTFDEPASRHV
QVAEMVIERAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVKEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELPLSRKIAEKRVFPAIDY
NRSGTRREELLTVPEELQKMWILRKIIHPMGEIDAMEFLINKLSMTKTNNEFFNMMKRSK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccaaattaaaaaatacatctgtttcaaaacttattattttaggtgaaaaa
attggtcttgaaaatttagctcgcatgcgtaaacaagatattattttttctatattaaag
caacattcaaaaagtggagaagatatatttggagatggggttttagaaattttacaagat
ggatttggatttttacgatcatctgacagttcatatttagccggacctgacgatatttac
gtttctcctagtcagattcgtagatttaatttaagaacgggagatacaatttctggaaaa
attagacctcctaaggaaggagaacgttattttgctttattaaaagtaaataaagtaaat
tatgatcaacctgagaatgctcgcagtaaaattttatttgagaatttaactcctttacat
gcaaactctagattacaaatggaaagaggaaatggttctaaagaagatttaactgccaga
gttttagatctagcttcacctataggtcgtggtcaaagaggactaattgtagctccgcct
aaagctggaaaaactatgttattacaaaacatagctcaaagtattgcatataatcatcct
gattgtgtattaatggttttattaattgacgaacgaccagaagaagtgacagaaatgcaa
agattagtaaatggtgaagttgttgcatcaacttttgatgaaccagcatcacgtcatgta
caagttgcagaaatggttattgaacgtgctaaaagattagtagaacataaaaaagatgta
attattttattagattctatcactagattagcacgagcatataatactgttgttccagct
tctgggaaagttttaactggaggagtagatgctaacgctttacatcgtcctaaaagattt
tttggtgcagcgcgtaatgttaaagaaggtggtagtttaacaattatagctactgcttta
atagataccggttctaagatggatgaggttatttatgaagagtttaaaggtacaggtaat
atggaattaccattatcaagaaaaatagcagaaaagcgtgtttttcctgcaattgattat
aatcgttctggtacacgaagagaagaattattaactgttcctgaagaactacaaaaaatg
tggattttacgaaaaattattcatcctatgggagaaattgatgctatggagtttttaata
aataaattgtccatgacaaaaacaaataatgaattttttaatatgatgaaacgttcaaaa
taa
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