Bartonella clarridgeiae: BARCL_0034
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Entry
BARCL_0034 CDS
T01394
Name
(GenBank) putative ATP-dependent nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
bcd
Bartonella clarridgeiae
Brite
KEGG Orthology (KO) [BR:
bcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcd03400
]
BARCL_0034
Enzymes [BR:
bcd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BARCL_0034
DNA repair and recombination proteins [BR:
bcd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BARCL_0034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
DEAD
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
CBI75715
UniProt:
E6YFS7
LinkDB
All DBs
Position
complement(24565..28023)
Genome browser
AA seq
1152 aa
AA seq
DB search
MTIFSIPQTALNTQAKATDPIKNVWVSANAGSGKTHVLTERVIRLLLNGTPPARILCLTY
TNAAASVMQSRIFRTLSSWNQFDDKQLQKILSNLENKPANAKKLANARQLFARALETPGG
LKIQTFHAFCESLLHQFPLEANIAGHFELLDDINRKKLLKQARSKLLTHRDAQLALKELF
KVINENTLNQLLYEATQKQHELSDFLPLILSENGKEQLRTFFNLAPNETNQKLLDKIQQT
ATLPSYAIKHYQTYSTPKNKDIIEKFLQLATASDETNIINLVSNIYFVKAGKPRDFSRLF
SKKSDEIWPFIEKEIEDKQNQLSILLEKYQCLKLITLNIAAFQLCYIYLKIYADLKKVNN
VLDFDDLIERTLHLLQHKGASQWVQYKLDRGIDHILLDEAQDTNPKQWQIIQLLAQEFFA
GHSQRTNIRTVFAVGDEKQSIYSFQGAVPENFAENGRMIQKKVQQVEQKFEKIQLNYSFR
STADILKSVDLVFETPENYKGLSAEHVKTVHEPIRVHSPGDVIIWDTISQKTNELPDDWL
STVDHLDTPQIRLAEKIAETIANWLKNGEMLPAKKRLLRASDIMVLVRKRDQFVSALSRA
LKLRHVPVAGADRLQLTAHISVLDLMALARFVLQPQDDLSLACVLKSPLFSLSENELYQL
AAQRKGSLWESLCTHTSSHASFKTIFDRLNTYRALVDKMPVFEFYSYILNNDKGRQKILA
RLGTEANEVLDAFMDHTLTIQKTGLPGLQAFLEILSINEPEIKRELDQNCEEVRIMTVHA
AKGLEGAVVFLVDPGSAIWHPKYAPHFLKFFLGDKQTFIWRPNAQHHTKHFDKVLSRLKE
RAEEEYKRLLYVGMTRAEDRLIICGYSNQKETPNTWLQLVKKALKPHAVSIKGPAEDIAA
WRYCITSSCSTPMYQEIPCDAHHVFPPLPAFFHDKMPTESTLSKPLRPSVAGIIDAKTEF
FPNKKHFSLSPVLEEKNTKRTFSIEYGNFIHKLLQHLPNYTPTKRQDYAQFYLNTKASHW
HKTQRENALHHIWKILDNPKLKPLFSRFSHAEVALMGIVKINGKEQIISGQIDRLCITDN
SVFFADFKTGLPPENDTDIAQRHLLQMALYQKLLQAIYPNKNMQALLIYIKKAKIFKLLP
EKLDALLDEMIL
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgactattttctctattcctcaaacagctcttaatacacaagcaaaagccaccgatccg
ataaaaaatgtctgggtttctgctaatgcgggatctggaaaaactcatgttttaaccgaa
cgtgtcatccgcttacttttaaatggaacacctccagcacgtattttatgtcttacctat
actaacgcagccgcttctgttatgcagtcgcgtatttttcgtacactttccagttggaat
cagtttgatgataaacagcttcaaaaaatcttatctaatctcgaaaataaacctgctaat
gcaaaaaaacttgccaatgcgcgtcaattatttgcccgtgctcttgaaacaccaggtggt
ttaaaaatccaaacttttcatgcattttgtgaatctttattacaccaatttccattagaa
gctaacattgctggacattttgaactgttagatgatataaaccgaaaaaaattattaaag
caagcccgtagcaaacttttaactcatcgtgatgcacaactagcgttaaaagaattattt
aaagtcatcaatgaaaatacactcaatcaactgctctatgaggctacccaaaaacagcat
gaattatctgatttcttacccttaatcctttctgaaaacggaaaagaacaattacgtaca
ttttttaatttagcaccgaatgaaacaaaccaaaaactgctagacaaaattcaacaaact
gctacactcccttcttatgcaatcaaacattatcagacctatagtaccccaaaaaacaaa
gatataatcgagaaattcttacagttagcaacagcatctgatgaaacaaatatcatcaat
cttgtttcaaatatttattttgtaaaagcaggaaaaccacgtgatttttcacgcttattc
tccaaaaaatcagacgaaatctggccttttatcgaaaaggaaattgaagataaacaaaat
cagctttctattcttttagagaaatatcaatgtttaaaactcattacacttaatatagct
gcttttcagctttgttatatttatcttaaaatctatgcggatttaaaaaaagtcaataac
gttttagactttgacgatctcattgaacgtacacttcatttattgcagcacaaaggtgca
agccagtgggtacagtataaactcgaccgtggaattgatcatattttgcttgatgaagca
caagataccaatcctaaacaatggcaaattattcaacttttagcgcaagagttttttgca
ggtcatagtcaacgcacaaacatacgtactgtttttgctgttggtgatgagaaacaatcc
atctattcttttcaaggtgctgtaccagaaaattttgctgaaaatggccgaatgattcaa
aaaaaagtccaacaagttgaacaaaaatttgaaaaaatacaactcaattattcttttcgc
tctacagctgacatccttaaaagtgttgatcttgtgttcgaaacccctgaaaattataaa
gggctttcagcagaacatgtaaagacagtgcacgaacctatccgtgttcatagtccaggt
gatgtcattatatgggacaccatttcccaaaaaacaaacgaacttcctgatgactggctc
tcaactgttgatcatctggatacacctcaaatacgtttagcagaaaaaattgctgaaacc
attgccaattggttgaaaaatggtgaaatgctcccagcaaaaaaacgtttactgcgtgct
agtgatattatggttttagttcgtaaacgtgaccaatttgtttctgccctttctcgtgca
ctcaaactacgtcatgttcctgtagctggtgctgatcgtttacaattaactgctcatatt
agtgtacttgatttaatggcacttgcacgttttgtcttgcaaccgcaagatgatctttct
cttgcttgtgttttaaaaagtccacttttttcccttagtgaaaatgaactttatcagctt
gctgctcaacgtaaggggtctctttgggaaagcctttgtactcatacttcatcgcatgcc
tcttttaaaactatttttgatcgtctcaacacatatcgcgctttagttgataaaatgcca
gtctttgaattttatagttatattctcaacaatgataaaggacgacagaaaattcttgcc
cgtttaggaactgaagcgaatgaagtgcttgatgcttttatggatcacacactcactatt
caaaaaactggactaccaggattacaagcctttttggaaatattgagtataaatgaacca
gaaatcaaacgtgaacttgatcaaaactgtgaagaagtaagaattatgaccgttcatgct
gccaaagggctagagggagctgttgtctttttggtcgatccagggagtgcaatatggcat
ccaaaatatgcaccacactttcttaaattcttcttaggagataaacaaactttcatctgg
cgtccaaatgcacaacaccacacaaagcattttgacaaagtgctttcacgtttaaaagaa
cgtgctgaagaagaatataaacgtcttctctatgtgggtatgacacgtgctgaagatcga
ctaattatttgtggttatagtaatcagaaagaaacccctaacacatggctgcaattagtg
aagaaagcccttaaacctcatgcagtttctataaaaggtcctgcagaagatattgcagct
tggcgttactgcatcacatcttcctgttcaacgccaatgtatcaagaaataccttgtgac
gctcaccatgtctttccacctttacctgctttctttcatgataaaatgcctacagaatca
accttatcaaaacctttaagaccctctgttgctggcatcattgatgccaagactgaattt
tttcccaataaaaaacattttagtctctcacctgttctagaagaaaaaaatactaagaga
actttttctattgaatatggtaattttattcacaaattactgcaacatcttcccaattat
acccccacaaagcgccaagattatgcgcaattctatttaaatacaaaagcttctcattgg
cataaaacccaaagagaaaacgccctccatcatatttggaaaatcttagataatcccaaa
cttaagccacttttttctcgcttttcacatgctgaagtcgctctaatgggtatcgtgaaa
attaatggtaaagaacaaataatttctggtcaaattgaccgtttatgtatcaccgataat
agtgtcttttttgctgatttcaaaactggtcttccaccagaaaacgatactgatattgct
caacgccatttactacaaatggctctttatcagaaattgttgcaagctatctatcctaat
aaaaatatgcaagctcttctcatttatattaaaaaagccaagatttttaaactgcttcct
gaaaaacttgacgcacttcttgatgaaatgattttataa
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