Bartonella clarridgeiae: BARCL_0083
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Entry
BARCL_0083 CDS
T01394
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
bcd
Bartonella clarridgeiae
Brite
KEGG Orthology (KO) [BR:
bcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bcd03016
]
BARCL_0083 (truA)
Enzymes [BR:
bcd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
BARCL_0083 (truA)
Transfer RNA biogenesis [BR:
bcd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BARCL_0083 (truA)
Prokaryotic type
BARCL_0083 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
DUF4108
DUF3489
Motif
Other DBs
NCBI-ProteinID:
CBI75764
UniProt:
E6YFX6
LinkDB
All DBs
Position
complement(92917..93660)
Genome browser
AA seq
247 aa
AA seq
DB search
MARFKLTLEYDGSNYAGWQRQANLRTIQGSIEQAIFHFSGQKLTITTAGRTDAGVHATGQ
VAHIDFEKNWNTHTVRDALNAHLQKQGEDISILNVQNVPDNFDARFCATKRHYLFKILNR
RSPPVLNAKRVWWLPKPLDADAMHKAAQRLVGQHDFTTFRSAHCQAKSPIRTLERLDIQR
KGEEIFLYAQARSFLHHQIRSFAGSLMEVGIGRWTAEDLEAALHAKNRARCGVVAPPSGL
YLIKVDY
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggcacgttttaaacttactcttgaatatgatggctcaaattatgctggctggcaacgt
caagcgaatctccgtacgatacaaggttccattgagcaagctatttttcactttagcgga
caaaaactaaccatcacaacagctggaagaaccgatgctggagtccatgctacaggacaa
gttgctcatattgattttgagaaaaattggaatacgcatactgtacgtgatgctctcaat
gcacatttgcagaaacaaggagaagatatttctattctaaatgtccagaatgttcccgat
aactttgatgcacgattttgtgcgactaaacgccactatctttttaaaattctcaatcgt
cgctcaccaccagttctcaatgccaagcgcgtttggtggttaccaaaaccactagacgct
gatgctatgcataaagcagctcaaagacttgtcggacagcatgattttaccactttccga
tcagctcactgccaagccaaaagtcctatccgtactcttgaacgcttagatatccaaaga
aaaggagaagaaattttcctttatgcacaagctcgttcttttcttcaccatcagattcgt
tcatttgcaggaagtctgatggaagtcggtattggacgctggacagctgaagatctcgaa
gcagctcttcatgctaaaaatcgcgctcgttgtggtgtagttgcacctccctcaggcctt
tatttgataaaagttgactattaa
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