Bartonella clarridgeiae: BARCL_0153
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Entry
BARCL_0153 CDS
T01394
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bcd
Bartonella clarridgeiae
Pathway
bcd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BARCL_0153 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcd03019
]
BARCL_0153 (pnp)
03016 Transfer RNA biogenesis [BR:
bcd03016
]
BARCL_0153 (pnp)
Enzymes [BR:
bcd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BARCL_0153 (pnp)
Messenger RNA biogenesis [BR:
bcd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BARCL_0153 (pnp)
Transfer RNA biogenesis [BR:
bcd03016
]
Prokaryotic type
tRNA degradation factors
BARCL_0153 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
CBI75834
UniProt:
E6YG46
LinkDB
All DBs
Position
complement(169282..171483)
Genome browser
AA seq
733 aa
AA seq
DB search
MFKTHKVEIEWAGRPLILETGKIARQADGAIIATYGETVVLATVVSAKTPKPDQNFFPLT
VNYQEKNYAVGKIPGGYFKRENRPNESETLISRLIDRPIRPLFVEGYKNDTQVIVSVIQH
DLENNPDILAIIASSAALTLSGIPFMGPIAAARIGYCNGQYILNPNIDEMPESKLDLVVA
GTENAVLMVESEAHELPENVMLNAIMFGQKSFQPVINAIIKLAEVAAKEPRDFIPENLSV
LEKNMLKMVEQDLKDAYTITDKQKRHTAIDVLKEEVINKFMQKTEENCEFNTDQIATVFK
HLQAKIVRQNILDTGKRIDGRNPSDVRAIQSEVGILPRTHGSALFTRGETQALVVTTLGT
GEDEQYIDSLTGMYKETFLLHYNFPPFSVGEIGRIGSPGRREIGHGKLAWRAIHPMLPTK
ESFPYTIRTVSEITESNGSSSMATVCGTSLALMDAGVPLARPVAGIAMGLIKEGEKFAIL
SDILGDEDHLGDMDFKVAGTENGITSLQMDIKIDGITEEIMKIALAQAKDGRIHILNEMA
KALTSARSELSEFSPRIEMMNITVDKIRDVIGSGGKVIREIVEKTGAKINIEDDGTIKIA
SSDLKTIEAAKHWILSIVDEPEIGAIYQGTVVKIAEFGAFVNFFGSRDGLVHISQLASER
VAKTTDIVKEGDKVWVKLMGFDERGKIRLSMKVVDQQTGKELINNDSIKTEKDNNTDEKN
PSEKKHRSKKKED
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaacccataaggtagaaattgaatgggccggtcggccacttatcctcgaaaca
ggaaaaattgcacgtcaagcagatggtgcaattattgctacatatggtgaaactgttgtt
ttggcaactgtcgtttcagcaaaaactccaaaaccagatcaaaatttttttccgctcacc
gttaattatcaagaaaaaaactatgcagttggtaaaatacctggcggttattttaaacga
gaaaaccgtccaaatgaaagtgaaactttgatttcacggttgattgatcgtccaattcgt
cctctctttgtcgaaggttataaaaatgacacacaggtgatcgtctctgttattcagcat
gatctagaaaataatcccgatatccttgctataattgcatcttctgctgcattaactcta
tcaggtattccttttatgggtccaattgctgctgctcgtattggctattgtaatggacag
tatattctcaatcctaatattgatgagatgcctgaatcaaaacttgatcttgttgttgct
ggaacagaaaatgctgtactaatggttgaatcagaagcgcatgagttacctgaaaatgta
atgttgaacgctatcatgtttggccaaaaaagttttcaacctgtaattaatgccattatc
aaacttgccgaagtagccgctaaagaacctcgcgattttattccagaaaatctgtctgtc
cttgaaaaaaatatgcttaaaatggtcgaacaggacctgaaagacgcttatacaatcact
gataaacaaaaacgtcacactgcgattgatgttcttaaagaagaagtcatcaataaattt
atgcagaaaacagaagaaaactgcgaatttaatacagatcagattgcaactgttttcaaa
catttgcaagcaaaaatcgttcgccaaaatatccttgataccggaaaacgtattgatggg
cgtaatccttcagatgttcgtgcaattcaatcagaggttggtattttgccccgcacacac
ggatcagcgttatttacccgtggtgaaacacaagcacttgtcgtaacaacattaggaact
ggagaagatgagcaatatatagactccttaacaggtatgtataaagaaacattcctcctt
cattacaatttcccgcctttttcagtaggtgaaataggccgtattggctctcctggccgc
cgcgaaattggtcatggtaaactggcatggcgcgctattcatcccatgttgccgacaaaa
gaatcctttccctacaccattcgtactgtatcagaaattaccgaatcaaatggatcttct
tcaatggcaaccgtttgcggaacctcactagcactcatggatgctggtgttcctctagca
cgtcctgttgctggtattgcaatgggcttgattaaagaaggtgaaaaatttgctattcta
tctgacattttaggggatgaagatcaccttggtgatatggatttcaaagtagcgggtaca
gaaaacggtattacttctttgcaaatggatatcaaaattgatggcattactgaagagatt
atgaaaattgcacttgcacaagctaaagatggtcgaatccatattctcaatgaaatggca
aaagccttaactagtgcacggagtgaactcagcgaattttctccacgtattgaaatgatg
aacattactgtagataaaattcgtgatgttatcggttctggtggtaaagtgatacgggaa
attgtagaaaaaactggagctaaaattaatattgaagatgatggaacaattaaaattgct
tcttctgatctaaaaaccattgaagcagcaaaacattggatcctttcgattgttgatgaa
cctgaaatcggtgctatttatcaaggaacggttgttaaaattgcagaattcggtgcattt
gttaacttttttggttcacgcgatggacttgttcatatctctcaacttgcatcagaacgc
gtagcaaaaacaaccgatattgtcaaagaaggtgataaggtttgggttaaattaatgggt
tttgatgaacgtggtaaaattcggttatcgatgaaagttgtcgaccaacaaactggaaaa
gaacttatcaataatgactcgataaaaacagaaaaagacaataatactgatgaaaagaat
ccatctgaaaagaaacaccgtagtaagaaaaaagaggattaa
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