Bartonella clarridgeiae: BARCL_0193
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Entry
BARCL_0193 CDS
T01394
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
bcd
Bartonella clarridgeiae
Brite
KEGG Orthology (KO) [BR:
bcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bcd03016
]
BARCL_0193 (rnd)
Enzymes [BR:
bcd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BARCL_0193 (rnd)
Transfer RNA biogenesis [BR:
bcd03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BARCL_0193 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Glyco_hydro_95_cat
Motif
Other DBs
NCBI-ProteinID:
CBI75874
UniProt:
E6YG86
LinkDB
All DBs
Position
213659..214240
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AA seq
193 aa
AA seq
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MDNYCVNSIAIDTETLGLKPHRDRLCVVQLSSGDGTADIIQVAKGQNRAPNLVALLEDKA
ITKIFHFGRFDLAILAHTFGVIPDVVFCTKIASKLTRTYTDRHGLKEICSELLNINISKQ
QQSSDWAADALSRAQIEYAASDVLYLHRLKNIFEERLKREEREDIAKACFQFLPVRAKLD
LLGWSEVDIFAHV
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
ttggataattattgtgttaattctattgcaattgataccgaaactttaggattgaaacca
caccgtgatcgtttatgtgtggttcaactttcttctggagatggtactgctgatattata
caggttgctaaaggacaaaatagggctcctaatttggttgcattgcttgaagataaagca
attaccaaaatatttcattttgggcgttttgatcttgctattttagcacatacatttggt
gtgatacccgatgttgttttttgcacaaagattgcctcaaaattgacgcgtacttatact
gatcgtcatggtttgaaggaaatttgtagtgaattactgaatattaatatttctaaacag
caacaatcatcagattgggcagcagatgctttatcgcgtgcacaaattgagtatgcggcc
tctgatgttttatatctacatcgtttaaaaaatatatttgaagaacgtttaaaacgcgaa
gaacgagaagatattgcaaaggcgtgttttcaatttttgcctgtaagagcaaagcttgat
cttttgggatggtcagaagttgatatctttgcccatgtttga
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