Bartonella clarridgeiae: BARCL_0228
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Entry
BARCL_0228 CDS
T01394
Symbol
rluD
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
bcd
Bartonella clarridgeiae
Brite
KEGG Orthology (KO) [BR:
bcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bcd03009
]
BARCL_0228 (rluD)
Enzymes [BR:
bcd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
BARCL_0228 (rluD)
Ribosome biogenesis [BR:
bcd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BARCL_0228 (rluD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
CBI75909
UniProt:
E6YGC1
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All DBs
Position
complement(249281..250288)
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AA seq
335 aa
AA seq
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MAQHITNTNENACGQRIDQWLAKQYKGEISRSRLQTLIREGHLKIDGQLIKEPKTKLKSN
QIIELIIPAPNDARPQGEALALDIFFEDDHVIVINKPAGLVVHPGNGNWTGTLVNALIYH
CSDSLSGIGGIKRPGIVHRLDKDTSGVMVIAKNDIAHRNLNAQFADHGRTSALDRRYHAI
IWGSPNRNIATIDTFLARSSHDRTKRAVVHSEHANARHAITHFSLLEKYGTCNDTTPFAS
LLECRLETGRTHQIRVHMAHIGHPLIGDKVYGNAFKTKSNVLDPVIKNKIDQFNRQALHA
TSLTFEHPVNGEIMSFSSPFPKDLADLINHLKKLN
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
gtggcacaacacataacaaatacaaatgaaaatgcatgtgggcaacgaattgatcaatgg
cttgctaaacaatataaaggtgaaatatcgcgttcgcgtttgcaaactctaatccgcgag
ggtcatttaaaaattgatggtcaattaataaaggaaccgaaaacaaaattaaaatctaat
caaataattgaattgataatacccgcccctaatgacgcacgacctcaaggtgaagcttta
gctcttgatattttctttgaagatgatcatgttattgttattaataaaccagccggtctt
gttgtccatcctggcaatggtaattggacaggcaccttagtaaacgctcttatttatcat
tgtagtgatagtttatctggcatcgggggtattaaacgtcctggtattgttcatcgtctc
gataaagacacaagcggtgttatggttatcgctaaaaatgatattgctcatagaaacctt
aatgcccaatttgctgatcatggacgaactagcgcattagaccgacgttatcatgctata
atttggggctctcctaatcgcaatattgcgacaattgatacattccttgcccgttcttct
cacgatcgaacaaagcgcgctgttgttcatagtgaacatgctaatgctcgccatgctatt
acgcatttctctttattagagaaatacggaacttgtaacgatacaacaccttttgctagt
ctcctggaatgtcgtctagaaaccggacgcacacatcaaattcgcgttcatatggcccat
attggacatccccttataggtgataaagtttatggaaacgcttttaaaacaaaatcaaat
gttcttgaccctgtaattaaaaataaaattgatcagtttaatcggcaagcgctccatgca
actagccttacttttgagcatccagttaacggcgaaattatgtctttttcctcgccattt
cccaaagatctcgctgatctcatcaatcatttaaaaaaacttaattga
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