Bartonella clarridgeiae: BARCL_0298
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Entry
BARCL_0298 CDS
T01394
Symbol
trmU
Name
(GenBank) tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
bcd
Bartonella clarridgeiae
Pathway
bcd04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
bcd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
BARCL_0298 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bcd03016
]
BARCL_0298 (trmU)
Enzymes [BR:
bcd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
BARCL_0298 (trmU)
Transfer RNA biogenesis [BR:
bcd03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
BARCL_0298 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
Asn_synthase
QueC
Arginosuc_synth
NAD_synthase
DUF7411
ThiI
ATP_bind_3
PGM1_C
Motif
Other DBs
NCBI-ProteinID:
CBI75979
UniProt:
E6YGJ1
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All DBs
Position
322707..323936
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AA seq
409 aa
AA seq
DB search
MFLNSLDLPGHPENSRIVVAMSGGVDSSVVAGLLKKEGYDVVGITLQLYDHGAATHRVGA
CCAGQDIEDARRVAETLGVPHYILDYEERFREAVINPFAESYAHGETPVPCVSCNQTVKF
ADLLATAYELGADALATGHYIRSRVHGAHRALFRPLDADRDQSYFLFATTQEQIDYLRFP
LGDLSKDRVREIATEMGLVVANKHDSQDICFVPQGRYSDVITKLRPEVANPGVIVHIDGQ
ILGEHSGIVNYTVGQRRGIGVATGEALYVIYLDVENARVIVGPREMLETRRLFLRDVNWL
GDERLDNFPLDGIDVAVKVRSTRPPRPARLHYKQGLFSVDLLESESGIAPGQACVLYNEN
SYEARILGGGFITRSEHAADTEKMLKQVLCNLETKSSTFFKGKTTIACK
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtttttaaatagtcttgatttgccagggcaccctgaaaattctcgtattgttgttgca
atgtctgggggagttgattcatcggttgttgcaggcctcttaaaaaaagaaggttatgat
gtagtggggattacgttgcagttgtatgatcacggtgctgcaacacatcgtgtaggtgca
tgttgtgcaggacaagatatcgaagatgcgcgccgtgtagcagaaactttgggtgtacct
cattatattcttgattatgaagaacggtttcgtgaagctgtcattaatccttttgcagaa
agctatgcacatggagaaacacctgttccatgtgtttcttgtaatcagactgttaaattt
gctgatttgttagcaactgcctatgagttaggtgcagatgccttagcaacaggtcattat
attcgcagtcgtgtccatggtgcacatcgggcattatttcgtcctctggatgctgatcgt
gatcagagttattttttgtttgctacgacgcaagagcaaattgactatttacgttttcca
ttaggtgatctttcaaaagatcgtgtgcgtgaaatagcaaccgaaatgggtttagttgtt
gctaataaacatgatagccaggatatttgcttcgtgccacagggaagatactctgatgtt
attacaaaattaagaccagaagtcgcaaatcccggagttattgtgcatattgatggacag
attttgggagaacactcaggaattgttaattatactgttggtcaacgtcgtgggattggt
gttgcaacgggtgaagcactttatgtaatttatcttgatgtagaaaatgcgcgtgttatt
gttggcccgcgtgaaatgttggaaacacgcaggctttttttacgtgatgtgaattggctt
ggtgatgagcggttagataattttcctcttgatggtattgatgtggcagtaaaggttcgt
tcaacgcgtcctccacgtccggcacgtttacattataaacaaggattattttctgttgat
ttgttggaaagtgaaagtggtatagcgcctggtcaagcttgcgttctttataatgaaaat
agttatgaagcgcgtattcttggaggcggatttattacacgttcagagcatgcagccgat
actgaaaaaatgttaaagcaagttttatgcaatttagaaacaaaatcttctacctttttc
aaaggtaaaacaactattgcatgtaaataa
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