Bartonella clarridgeiae: BARCL_0400
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Entry
BARCL_0400 CDS
T01394
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bcd
Bartonella clarridgeiae
Pathway
bcd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bcd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BARCL_0400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcd03400
]
BARCL_0400
Enzymes [BR:
bcd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BARCL_0400
DNA repair and recombination proteins [BR:
bcd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BARCL_0400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CBI76081
UniProt:
E6YGU3
LinkDB
All DBs
Position
complement(438885..439736)
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AA seq
283 aa
AA seq
DB search
MDQLKAKSEMSKKIKDLILSEDLLNFYKESGVDTALTDVPIDRFNQPTTPLEPQLNQAYN
PPHHKQISPTIKPYALPPYNPNNTQPALSAIEIAKNAQTLDELKSALLSFNDCSLKLTAK
NTCFSDGTAGSPLMLIGEAPGREEDIQGIPFVGKAGILLNKILASIGLTRQNVYIANTIP
WRPPGNRTPTPREVALCRPFIERQIFLAKPRILIALGGTATQFFTGVQSSIIRIRGKWLT
YENENLKIPVMPTFHPAYLLRTPSQKKLTWIDFLEVKNRLNNL
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggatcagctaaaagcaaaaagtgaaatgtcaaaaaaaataaaagatttaatcttaagt
gaagatctgctcaacttctataaagaaagcggagttgatactgcgctcactgatgttcct
attgatcgctttaatcaacccactactcctttagaaccgcaattaaatcaagcatacaat
cccccccatcataaacaaatatcaccaaccataaaaccgtatgctcttccaccctataat
cccaataacacacaacctgctctttcagctatagagatagcaaaaaatgcccaaacactt
gatgagttgaaatctgctctcctctcttttaacgactgctcattaaaactaacagctaaa
aatacttgtttttcggatggaacagcaggaagtcccctgatgctcataggtgaagctcca
ggacgagaagaagatatacaaggaattccatttgtaggaaaagcaggaatattactcaac
aaaatactagcatcaattggtcttacaagacaaaatgtttacatagcaaatactattccc
tggcgtccaccaggaaaccgcacaccaacgccacgcgaagttgcattatgtcgtcccttt
attgaacgtcaaatttttctagccaaacctcgtatccttatagcactaggaggcactgct
acacaattttttacaggggttcagagtagcattattcgaataagagggaaatggcttact
tatgaaaatgaaaatcttaaaatacccgttatgccaacctttcatcctgcttatctttta
cgaacgcctagtcaaaaaaagctcacatggatagactttttagaagtaaaaaaccgttta
aataatctttag
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