Bartonella clarridgeiae: BARCL_0515
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Entry
BARCL_0515 CDS
T01394
Symbol
rpoZ
Name
(GenBank) RNA polymerase omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
bcd
Bartonella clarridgeiae
Pathway
bcd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bcd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BARCL_0515 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcd03021
]
BARCL_0515 (rpoZ)
03400 DNA repair and recombination proteins [BR:
bcd03400
]
BARCL_0515 (rpoZ)
Enzymes [BR:
bcd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BARCL_0515 (rpoZ)
Transcription machinery [BR:
bcd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BARCL_0515 (rpoZ)
DNA repair and recombination proteins [BR:
bcd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BARCL_0515 (rpoZ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
MinE
SH3-WW_linker
Motif
Other DBs
NCBI-ProteinID:
CBI76196
UniProt:
E6YH58
LinkDB
All DBs
Position
560854..561252
Genome browser
AA seq
132 aa
AA seq
DB search
MARVTVEDCIDKVDNRFELVLLAGHRARQISQGAQITIDRDNDKNPVVALREIADQTLSP
ADLKEDLIHSLQKYVEVDEPEGAMEFISHSSESGDVLGSSSEEGNSAFDYMSEEELLAGI
ESLVVPEKNDDY
NT seq
399 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtgtaacagtagaagattgtattgataaggttgataatcgttttgagttggtg
cttttagctgggcatagggctcgtcagatttcacaaggtgcacagattacaatcgatcgt
gataatgataaaaatccagttgttgctttacgtgaaatagcagatcaaactttatctcct
gctgatttaaaagaagatcttattcattctttacaaaagtatgtggaagtcgatgaacca
gaaggagcaatggagttcatttctcattcaagcgaatccggagatgttttgggctcttca
tcagaagagggcaatagtgcatttgattacatgtcagaagaagagcttttggcaggtatt
gaaagtttagttgtaccagagaaaaatgatgattattaa
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integrated database retrieval system
