| Entry |
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| Symbol |
dnaE
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| Name |
(GenBank) DNA polymerase III alpha subunit
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| KO |
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| Organism |
bcd Bartonella clarridgeiae
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:bcd00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BARCL_0679 (dnaE)
03430 Mismatch repair
BARCL_0679 (dnaE)
03440 Homologous recombination
BARCL_0679 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:bcd03032]
BARCL_0679 (dnaE)
03400 DNA repair and recombination proteins [BR:bcd03400]
BARCL_0679 (dnaE)
Enzymes [BR:bcd01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BARCL_0679 (dnaE)
DNA replication proteins [BR:bcd03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BARCL_0679 (dnaE)
DNA repair and recombination proteins [BR:bcd03400]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BARCL_0679 (dnaE)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
749944..753432
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| AA seq |
1162 aa
MSGKKRKTLDNKDSLPRFIHLRVHSAYSLLEGALKIKQIIQHAISDHMPAIAITDTNNLF
GALEFSQYCFADGIQPIIGCQLAIDFDDENCNSSLAKLRHPSDYSSIVLFAASETGYAHL
VRLVSRAYLDKNDNDLPHIKADLLLTHHEGIIALTGGRSGPINLALAEDRKERAVERLTY
LKKIFGDRLYVELQRHGSYDRKVEAVLIELAYTYEIPLVATNEAFFLNKEGYAAHDALMA
VAEGQVVSDPDRKRVTPDHYLKSQDEMISLFSDLPEALENSVEIALRCHAYAPIRKPILP
RFIEQSADTSSVLESEAKELLNQAEAGLKMRLETIGLAEGYTIADYEQRLNYEISIITRM
QFSGYFLIVSDFIKWAKAHDIPVGPGRGSGAGSLVAYALTITDVDPLRFSLLFERFLNPD
RVSMPDFDIDFCQERREEVIRYVQKKYGCDQVAQIITFGKLQARAVLRDVGRVLEVPYRQ
VDYLTKLVPATPGSNVELAQAIIDEPKFEEEKKKDPVIGRMLDIALQLEGLYRHASTHAA
GIVIGDRPLSELVPMYRDPRSDMPVTQFNMKYVEQSGLVKFDFLGLKTLTVLKMAVDFVA
RKGTKVDLSHIPLNDEVTYAMMSRGETVGVFQVESAGMRKALIGMKPDCIEDIIALVALY
RPGPMENIPTYNIRKHKEEEITSIHPKIDHLVKETQGVIVYQEQVMQIAQVLAGYSLGEA
DLLRRAMGKKIHKEMQEQRTRFVSGAVDGGIDKDQANVIFDLLAKFADYGFNKSHATAYA
IVSYHTAYMKAHHPVEFLAASMTYDMTNTDKLNDFWREALRLGIEVIAPCVQTSHRIFEV
GENCIYYSLSAVKGVGDVVVDHIVACRGDKPFKDLEDFCERIDPRIVNKRAMESLIYAGA
FDCFNVAREVLLASLVTLNARALRILDNNSSGQIDIFGMIGGLKEPLILSQASPWSPAEK
LHYEFQAIGFYFSAHPLSEYQDVLIKKRVQTWKNFAASVKGGATAARLAGTIVARKIRKT
RSGKKMGVIQFSDTSGQYEAVIFSEGLSVYGDMLESGKSFIITVIAEDRSEGISLRIETI
ESLEEQALRHHKMMRLFIKTTDMLPQIKQNLDSKGNGEVALILIQEDGLREVEIALPKKY
KVDSRVVNAMKALPGIVDVELS |
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| NT seq |
3489 nt +upstreamnt +downstreamnt
gtgtcaggaaaaaaaagaaaaacactagataataaagattctctccctcgctttattcac
ttgagggtgcattcggcttattcacttcttgaaggtgctttaaaaatcaaacaaatcatt
cagcacgcaatttctgatcatatgcctgccatagctatcacggatacaaataatttattt
ggtgctttagaattttcacaatactgttttgctgatggtattcaacctattattggttgt
caacttgctattgattttgatgatgaaaattgtaactcgtctttagctaaattgcgccat
ccttctgattattcttccatcgtattatttgctgctagtgaaacaggttatgcgcatttg
gttcgacttgttagtagagcatatcttgataagaatgataatgatcttcctcacattaaa
gctgatttgctcttgacccatcatgaaggaattatcgctttaactggtggtcgaagtggt
ccgattaatttggctttggctgaagatagaaaagaacgagctgttgagcgtttaacttat
ttgaaaaaaatttttggtgatcgtctttatgttgaattacaacggcatggttcttatgat
cggaaagtggaagcagttctcattgaattagcttacacctatgagattcctcttgttgct
actaatgaagcgttttttctcaataaagaaggatatgctgctcatgatgcactcatggcg
gttgcagaaggacaagttgtttctgatccagatcgtaaacgtgtgacaccagatcattat
ttaaagtcgcaagatgaaatgatttcattgttttctgatcttccagaagctttggaaaat
agcgttgaaattgctttacgctgtcatgcttatgcaccaattagaaaaccaattttgcca
cgttttatagagcaatctgcagatacatcttctgttttagaatcagaagctaaagaatta
ttaaatcaagctgaagcaggtttaaaaatgcgtcttgagacaattggcttagcagaaggc
tatacaattgcagattatgagcagcggcttaattatgaaatttcaattattacgcggatg
caattttctggttattttctcattgtttcggattttatcaaatgggcaaaagctcacgat
attcctgtcggtccagggcgtggttctggtgctggctcgcttgttgcttatgcgctgact
atcaccgatgttgatcctttgcgcttttctcttttatttgaacgttttcttaatccagat
cgtgtttctatgccagattttgatatcgatttttgtcaagaacgacgcgaagaggttatt
cgttatgttcaaaaaaaatatggctgtgatcaagtagcgcagatcattacatttggtaaa
ttgcaagcacgtgcagtattgcgtgatgttggtcgtgttttagaagtaccttatcgtcag
gtagactatcttacaaaattagttcctgctactcccggtagtaatgttgagctagcacaa
gctattatcgatgaaccaaaatttgaagaagaaaagaaaaaggatcctgttattgggcgt
atgttggatatagcgcttcagctagaaggactctatcgtcatgcctccactcatgctgca
gggattgttattggtgatcgtccattatcagagcttgtaccgatgtatcgtgatccgcgc
tctgatatgcctgtaactcaatttaacatgaagtatgttgaacaatctggactggtaaaa
tttgattttttaggtttaaaaacgcttactgttttaaagatggctgtagattttgttgca
cggaaaggtacaaaagtagatttatcccatattccccttaatgatgaagtgacttacgct
atgatgtcacgtggtgaaacagttggcgtgtttcaagttgaaagtgctggtatgcgtaaa
gcgcttatcggaatgaaaccagattgcattgaagatattattgcacttgtagccctttat
cgtcctggtccgatggagaatattccgacatataatatacgcaagcataaagaagaagaa
attacctctattcatcctaaaatagatcatttggttaaagaaacgcaaggtgttattgtt
tatcaagaacaggtgatgcagattgctcaggtgcttgctggttattcacttggagaagca
gacttattgcgtagggctatgggtaaaaaaatccataaggaaatgcaagaacaacgtaca
cgttttgtaagtggagctgttgatggtggtattgataaggatcaggctaatgttatcttt
gatcttttagcaaaatttgcggattacggttttaataagtcgcatgctactgcttacgca
atcgtttcttatcatacagcttatatgaaagcacaccatcctgtagagtttttggctgca
tctatgacatatgatatgacaaatacagataagctaaatgatttttggcgtgaggcatta
agactaggaattgaggttattgcgccttgtgtgcaaacatcacaccgcatttttgaagtt
ggtgagaattgtatttattattctctttctgccgttaaaggagtcggagatgtggtggtt
gatcatattgtggcttgtcgtggagataagccttttaaggatttagaagatttctgtgaa
cgtattgatcctcgtattgtgaataagcgtgctatggaaagtttgatttatgctggtgct
tttgattgttttaatgttgcacgtgaagttctattggcaagccttgtaactcttaatgca
cgtgctcttcgtattcttgataacaattctagtggccaaattgatatatttgggatgata
ggtggattaaaagaacctttgattttatctcaagcttctccttggtctcccgctgagaaa
ctccattatgaatttcaggcaataggtttttacttttctgctcatcctttgagcgagtac
caagatgttcttattaaaaaacgtgttcagacttggaaaaattttgctgcctcagttaaa
ggaggagcaaccgctgctaggcttgctgggactattgtagcgagaaaaattcgcaaaaca
agatctggtaagaaaatgggggttattcagttttctgatacgagtgggcagtatgaagca
gttatattttccgaaggactttctgtgtacggagatatgctggagtctggaaagtctttt
atcattacagttattgcagaggatcgctctgaaggaattagtttacgtattgaaacaatt
gaatctttagaagaacaggcactgcgacatcataaaatgatgcgtcttttcataaaaaca
acagatatgcttccgcaaattaagcagaatttagattctaaaggtaatggagaggtagcg
cttatactgattcaagaggatggacttcgagaagttgagatagctctccccaaaaagtat
aaagtggattcacgcgtagtcaatgctatgaaagcccttcctggtattgtcgatgtcgag
ttgagctaa |
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