Bartonella clarridgeiae: BARCL_0710
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Entry
BARCL_0710 CDS
T01394
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bcd
Bartonella clarridgeiae
Pathway
bcd03410
Base excision repair
bcd03430
Mismatch repair
bcd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BARCL_0710 (recJ)
03430 Mismatch repair
BARCL_0710 (recJ)
03440 Homologous recombination
BARCL_0710 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcd03400
]
BARCL_0710 (recJ)
DNA repair and recombination proteins [BR:
bcd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BARCL_0710 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BARCL_0710 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BARCL_0710 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
QRPTase_C
CDC45
Motif
Other DBs
NCBI-ProteinID:
CBI76391
UniProt:
E6YHQ3
LinkDB
All DBs
Position
786107..787891
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AA seq
594 aa
AA seq
DB search
MRRSHYLLNVESSAWGQAWVDALDIERVNNARAISQKFGLPDQLARVLAARDVDESEAIT
FINPTLRVLMPNPKDFIDMHCAAERLVKAIINREKIAVFGDYDVDGACSAALLARFLHYF
GIIVKIYIPDRIIEGYGPNEQAMKGLVQEGASLIITVDCGANSPDALRAAKFAGADVIVL
DHHQMENVHEEAVALVNPNRPDDLSEQGHLCAAGVVFITLIWVNRLLREKKWGGALPDLL
SMLDLVALATICDIVPLKGVNRAFVVKGLQVARSMRNPGIAALAKVAHIGEPLNSFHLGF
LLGPRINAGGRIGNQALGAYLLSCNDRDEADRIAQQLDQLNKERQEMEMIQLAQAEVYID
SIYQDEAMPSSFVIAHKEWHPGIIGILAARLKERFFCPVLAIALKEDGSGIGSGRSISGI
DLGALVHEAVTLNLLEKGGGHSMAAGFTIQSTKIEAFREWLEEKVSLMVSQLRAEKSLSI
DGFLSASGANKDLFDMIEKAGPFGSGNATPVFVFPSHRLVNLYEVGKGHLRLIISDIEGK
KLKGIAFGAVGTSLGKFLSKNIGKKIHLAGNLSLNHWRGSISPQLRVIDAAALA
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgatctcattatttacttaatgtcgaatcctcggcttggggtcaggcttgggtt
gatgctcttgatatagagagggttaataacgctcgtgctatttctcaaaaatttggttta
ccggaccaactcgctcgcgttcttgcagcaagagatgtcgatgaatccgaagctattact
tttattaatccaacactacgcgttttaatgcctaatccaaaagattttatagatatgcac
tgtgcagcagagcgtttggttaaagctattataaaccgagagaagattgctgtttttggc
gattatgacgttgatggtgcttgttcagcagcccttttagcacgttttttacattatttt
ggcataatagtaaaaatttatattcctgatcgtattattgaaggctatggtccaaatgaa
caagcaatgaaaggattggtacaagaaggggctagtctaattattacggttgattgtggt
gcgaatagtccggatgcattaagagcagctaagtttgcaggtgctgatgttattgtttta
gatcatcatcaaatggaaaatgttcacgaagaagctgttgcccttgttaatcctaatcgt
cctgatgatttgtctgagcagggacatttatgtgctgctggtgttgtatttattacatta
atatgggttaatcgtttattgcgggagaaaaagtggggaggagcacttcctgatctttta
agtatgcttgatcttgttgcattggctaccatctgcgatatagttccattaaaaggtgtt
aatcgtgcttttgtggttaaagggcttcaggtggcacgttctatgcgtaatcctggaata
gctgctttagcaaaggttgcgcatataggagaaccactcaatagttttcatttgggtttt
ttattggggcctagaattaatgcggggggacgtattggaaatcaagccttaggagcatat
ttgctcagctgtaatgatagagatgaagcggatagaatagcacaacaactagaccaactt
aataaagaacgtcaagaaatggaaatgattcaattagctcaagcagaagtttatattgat
tctatttatcaggatgaagcaatgccgtcatcatttgtgattgctcataaagaatggcat
ccaggtatcattggtattcttgcagctcgtttaaaagaacgttttttttgtcctgttttg
gcaatagctttaaaagaagacggaagtggtattggatcggggcgttcaattagtggtata
gatttgggagcacttgtgcatgaagcagtcacattaaatttattagaaaagggtggggga
catagtatggcggcggggtttacaattcaatcgacaaaaatcgaagcttttcgtgaatgg
ctagaagaaaaagtgtctttaatggtttcacaattacgtgctgagaaatctcttagtata
gatggttttctttctgcttctggcgcgaataaagatctttttgatatgattgaaaaggca
ggtccttttggttcaggaaatgcaacacctgtttttgtttttccttctcatcggttagtc
aatttatacgaagttggaaaaggccatttgcgccttattatttctgatattgaaggcaaa
aaattaaaaggaatcgcttttggtgctgtaggaacatcgcttggtaagtttctttctaaa
aatattggtaaaaaaatccatttggctggtaatcttagcttaaatcattggagaggaagc
ataagtccacaattacgtgttattgatgcagctgcattggcttga
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integrated database retrieval system
