Bartonella clarridgeiae: BARCL_0913
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Entry
BARCL_0913 CDS
T01394
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bcd
Bartonella clarridgeiae
Pathway
bcd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bcd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BARCL_0913 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcd03021
]
BARCL_0913 (rpoA)
03400 DNA repair and recombination proteins [BR:
bcd03400
]
BARCL_0913 (rpoA)
Enzymes [BR:
bcd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BARCL_0913 (rpoA)
Transcription machinery [BR:
bcd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BARCL_0913 (rpoA)
DNA repair and recombination proteins [BR:
bcd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BARCL_0913 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
IDH
Motif
Other DBs
NCBI-ProteinID:
CBI76594
UniProt:
E6YIA6
LinkDB
All DBs
Position
complement(1016625..1017638)
Genome browser
AA seq
337 aa
AA seq
DB search
MIQKNWQELIKPSKVEFHTHNDPNIVSVVAEPLERGFGLTLGNALRRVLLSSLRGAAVTA
VQIDSILHEFSSIPGVREDVTDIILNIKEIAIRMEEEGPKRIILCKEGPGVVKAGDIQTV
GDMAILNPEHVICTLDEDAEVRMELIVNTGKGYVPSERNCVDDAPIGLIPVDSLYSPVRK
VSYKVENTREGQILDYDKLTLTIETNGAVNGEDAIAFAARILQDQLLVFVNFEEPQKELI
EEPASELTFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSL
NEIKEVLACMGLHLGMEIPAWPPENIDDLAKRYEDQY
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgatccagaaaaactggcaggaattaattaaacccagtaaagtcgaatttcatacgcat
aatgatcccaacattgtaagtgttgttgcggagcctcttgagcgtggttttggtttgaca
ttaggaaacgcattgcgtcgtgtattattatcatcactccgtggtgctgcagttactgct
gtacaaattgatagtattttacatgaattctcatcaattccgggtgttcgcgaagatgtt
acagatattattttgaatatcaaagagattgctatacgtatggaagaggagggacctaag
cgaattattctctgtaaagaagggcctggtgtggttaaagctggggatatacagacggtt
ggagatatggcaatccttaatccggagcatgttatttgcacgctggatgaagatgcggaa
gttcgcatggaacttatcgtcaatacaggaaagggttatgttccatctgaacgaaattgc
gttgatgatgcaccaataggtcttattcctgttgatagcctttattcaccagttcgtaaa
gtatcttataaagtagagaatacgcgtgaaggacagattctggattatgataaattgacg
ttaacaattgaaactaatggtgctgttaacggtgaagatgcgattgcttttgcagcgcgt
attctgcaggatcagttattggtatttgtcaactttgaagagccacaaaaagaattgatt
gaagagccggcttctgagcttacttttaatccggcactgctcaaaaaggtagatgaatta
gaactttcagtgcgttcagcaaattgtcttaaaaatgataatattgtttatattggtgat
cttattcaaaaaacggaagctgaaatgcttcggacaccaaattttgggcgaaaatcatta
aatgaaattaaggaagttcttgcgtgtatgggactccatcttgggatggaaattcctgca
tggcctcctgaaaacattgatgatcttgctaaacgttatgaagatcagtattaa
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