Bartonella clarridgeiae: BARCL_1000
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Entry
BARCL_1000 CDS
T01394
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
bcd
Bartonella clarridgeiae
Pathway
bcd00470
D-Amino acid metabolism
bcd00550
Peptidoglycan biosynthesis
bcd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bcd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BARCL_1000 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BARCL_1000 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bcd01011
]
BARCL_1000 (murD)
Enzymes [BR:
bcd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
BARCL_1000 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
bcd01011
]
Precursor biosynthesis
Amino acid ligase
BARCL_1000 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
CbiA
2-Hacid_dh_C
NAD_Gly3P_dh_N
UDPG_MGDP_dh_N
ELFV_dehydrog
NAD_binding_2
AceK_regulatory
NAD_binding_7
KARI_N
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
CBI76681
UniProt:
E6YIJ3
LinkDB
All DBs
Position
complement(1106047..1107462)
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AA seq
471 aa
AA seq
DB search
MISVECYKGQKVAVFGLGQSGIATAKVLISCGAEVVAWDDNFSSVEAACKENIPTKNLYY
EDWSEFIALILAPGVPLTYPRPHWVVEKARQENIEIIGDIELFVRARNLFLQQNDFSDQD
VPFVAITGTNGKSTTTALLSHLLEKMGYDVQTGGNIGTAILTLKPFVKKRIYVIECSSFQ
IELAPSLQPTIGLLLNLTPDHIDRHGSFELYGQIKGRVVSKASNALISVDSLVCRALYQK
LFDEGYQIKPVSKERFIKNGFYVEGTKLFSVRYGHRHLLADLANMTSLRGSHNAENALMA
LATLQMLKITTSEISDIEEHLASYLGLAHRMQEVCKIGSILFINDSKATNAEASAPALAT
FNNIFWIVGGQAKEGGIDSLKGFFYKIRKAYLIGTAAENFARIIGSAFPFSMSLTLENAV
REAASDAARDTTQDAVILFSPACASYDQFKNYKVRGEAFVSLVMQLKKEEL
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
ttgatttctgttgagtgttataaaggccaaaaagttgctgtatttggattgggacaatca
ggaatagctacagcaaaagttttgatttcttgtggtgcagaagtagttgcatgggatgat
aatttttctagtgtggaagctgcttgtaaggaaaacattccaacaaagaatctatattat
gaggattggtcagaatttattgcgttgattttagctcctggagtacctttaacttatcca
agaccacattgggttgttgaaaaagcacgtcaagaaaatatagaaattatcggtgatatt
gagctatttgtccgtgctcgtaatctttttttacagcaaaatgatttttctgatcaagat
gttccgtttgttgctattacgggtacaaatggtaaatcaacaacgactgctttactttcc
caccttttagaaaaaatgggttatgatgtgcaaacgggaggaaatattgggacagcaata
ttaacgcttaagccatttgttaaaaaacgtatttatgttattgaatgttcgtcatttcaa
atagaattagctccatctcttcagccaactattggtcttttgttgaatttaacacccgat
catattgatcgtcatggtagctttgaactttatggacagatcaaagggcgtgtcgtttct
aaagcttctaatgctcttatttcagttgatagtttagtttgccgtgctttatatcaaaag
ctttttgatgaaggttatcagattaagccagtttctaaagagcgttttattaaaaatggt
ttttatgtagaaggaacaaagcttttttctgttcgttatgggcatcgtcatctgcttgca
gatttagctaatatgacttcgttacgtggaagtcataatgcggaaaatgctcttatggct
ctagcaactttacagatgttaaaaattactacctcagagatatcagatatagaagagcat
ttagcaagttatttagggcttgcacatcgaatgcaggaggtgtgtaagattggatctatt
ttgtttattaatgatagtaaggctacaaatgcagaggcatctgctcctgcacttgctact
tttaacaatattttttggattgttggaggacaagcaaaagaaggtgggattgattctctt
aaaggatttttttataaaattcgtaaagcgtatttaattggtactgcagcggaaaatttt
gcgcgcattattggttctgcctttcctttttcgatgagtctaactttagaaaatgcagtc
cgcgaagcggctagtgatgcagcccgtgatacaacgcaggacgctgtgattttgttttct
ccagcgtgtgcaagttatgatcaatttaagaattataaagtacgcggagaagcttttgtt
tctcttgttatgcagctaaagaaggaagaattatag
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