Bartonella clarridgeiae: BARCL_1385
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Entry
BARCL_1385 CDS
T01394
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
bcd
Bartonella clarridgeiae
Pathway
bcd00300
Lysine biosynthesis
bcd00470
D-Amino acid metabolism
bcd01100
Metabolic pathways
bcd01110
Biosynthesis of secondary metabolites
bcd01120
Microbial metabolism in diverse environments
bcd01230
Biosynthesis of amino acids
Module
bcd_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bcd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BARCL_1385 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BARCL_1385 (dapF)
Enzymes [BR:
bcd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
BARCL_1385 (dapF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Anti-RecBCD_p2
Motif
Other DBs
NCBI-ProteinID:
CBI77057
UniProt:
E6YJL9
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All DBs
Position
1510114..1510968
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AA seq
284 aa
AA seq
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MKTPFSKMNGLGNKIIVADMRENTHNITLQAVLALAKNPQTHFDQIMTIHPSTKNETDFR
IEIWNADGSKAKACGNGTRCVIEWLTNHNLGESFQLETPAGIVEGKRQANGLISVNMGRP
NFDIKNMPIAYEIADTNHVEITAGPLKDASLVSFGNLHAIFFVESNIQHIPLEKYGPKLE
HDPLFPERCNISIAFVTSRNSLILRTWERGAGLTKACGTAACASAVAAYRRGLTERRINV
NLLGGNLSILYQEDDHIIMTGPVEYEFSGLLSPLTGDYKKDSFK
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgccattcagcaaaatgaacggtcttggaaataaaattattgttgctgatatg
cgtgaaaacacacataatattacactgcaagcagttcttgctttagctaaaaatccacaa
acgcactttgatcaaatcatgacgattcacccgtcaaccaaaaatgaaactgattttcgc
attgaaatctggaatgctgatggttcaaaagcaaaagcttgtggtaatggtacgcgttgc
gttattgaatggctgacgaatcataatcttggtgaaagttttcaattagaaacacccgct
ggtattgtcgaaggtaaacgtcaagcaaatggtctgatctctgttaacatgggccgccca
aattttgatataaaaaatatgcctattgcttatgaaatagctgataccaatcacgtagaa
ataactgccggacctttaaaagatgcttctcttgtttcctttggaaatcttcatgctatt
tttttcgttgagagcaatattcaacatattcccttagaaaaatacggacctaaactcgaa
catgacccgctttttccagaacgctgtaatatttccattgcttttgtaacatcacgaaat
agcttaattttaagaacatgggagcgtggagcaggattaacaaaagcatgtggcactgct
gcttgcgctagtgcagtagctgcctatcgccgcggattaacagaacgccgtattaatgtt
aatttactgggaggaaatctctctattctttatcaagaagatgatcatatcattatgaca
ggtccagtagaatatgaatttagtggtcttttaagccctttaacaggggattacaaaaag
gattcttttaaatga
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