KEGG   Bacillus cereus ATCC 14579: BC3977
Entry
BC3977            CDS       T00127                                 
Name
(GenBank) Zn-dependent hydrolase
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
bce  Bacillus cereus ATCC 14579
Pathway
bce03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bce00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BC3977
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bce03019]
    BC3977
Messenger RNA biogenesis [BR:bce03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BC3977
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 DUF4453
Other DBs
NCBI-ProteinID: AAP10897
UniProt: Q819J9
LinkDB
Position
3953181..3954848
AA seq 555 aa
MKFLKNDQVAVFALGGLGEIGKNTYAVQFQDEIIIIDAGIKFPEDELLGIDYVIPDYTYF
VRNEDKIKGLFLPHGHEDHIGGIPYLLRQVNIPIYGGKLAIALIKNKLEEHGLLRKAKLY
EIQEDDVIKFKKTSVSFFRTTHSIPDSYGVVVKTPQGQVVHTGDFKFDFTPVGEPADLTK
MAEIGKDGVLCLLSDSTNSEVPNFTMSERRVGDSIQDIFRKVEGRIIFATFASNIHRLQQ
VVEAAVENNRKVAVFGRSMEAAIEIGQNLGYIRCPKDTFIDASQLNRLPANKVVILCTGS
QGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTISVSRTINMLYRAGADVIHGKL
SNIHTSGHGGQEEQKLMLRLIKPKYFMPIHGEYRMQRMHMNIANDCGIPEENCFIMDNGD
VLALRSDEASVAGKIPSGSVYIDGNGIGDIGNIVLRDRRILSEEGLVIVVVSIDMKEFKV
AAGPDIISRGFVYMRESSDLINDAQTLITTHLEKVMERKTTQWSEIKNEITDTLAPFLYE
KTKRRPMILPIIMEI
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgaaatttctaaaaaacgaccaagttgctgtatttgctctcggtgggcttggtgaaatc
ggtaaaaatacatacgctgttcaatttcaagatgaaattattataattgatgctggaatt
aaatttccagaggacgaacttctcggaatcgattatgtaataccagactacacttatttt
gtgcgaaacgaagataaaattaaagggttattccttccacatggtcacgaagatcatatc
ggcggaatcccttacctattacgtcaagtgaacattccaatttacggcggaaaattagca
attgcactcatcaaaaacaaattagaagaacacggcttacttcgtaaagcaaaactttac
gagattcaagaagatgacgttattaaattcaaaaaaacgtctgtatccttcttccgtaca
actcacagtattccagattcgtacggcgttgttgtgaaaacacctcaaggtcaagttgtt
catacaggtgacttcaaatttgacttcacaccagttggtgaaccagctgatttaacaaaa
atggctgaaatcggtaaagatggcgtactatgtctattatctgatagtacgaacagtgaa
gttccaaactttactatgtctgagcgtcgcgttggtgatagcattcaagacattttccgt
aaagtagaaggacggattatatttgcaacctttgcatcaaatattcaccgcttacaacaa
gttgttgaagctgctgttgaaaacaaccgtaaagtagctgtgtttggtcgaagtatggaa
gcagcgattgaaattggacaaaaccttggttatattcgttgcccgaaagatacattcata
gatgcatctcaactaaaccgcttaccagctaataaagttgttattttatgtacaggtagt
caaggtgaaccgatggcagcactttcacgtattgcaaacggtacacaccgccaaattcaa
attattcctggagatacagttgttttctcttcttcaccaattccaggaaatacaattagc
gtaagtcgtacaattaacatgttgtaccgcgctggcgctgatgtaattcatgggaaactt
tcaaatatccatacaagtggacacggtggacaagaagaacaaaagttaatgttacgtcta
attaaaccgaagtacttcatgccaattcatggtgaatatcgtatgcagcgtatgcacatg
aacatagcaaatgattgtggcatccctgaagaaaattgcttcattatggataatggcgat
gttcttgctttacgttcggatgaagctagcgtagctggaaaaatcccatctggttcggtc
tacattgatggaaacggtattggagatattggcaatatcgtattacgcgatcgtcgtatc
ctttctgaagaaggacttgtaattgtagttgtaagcattgatatgaaagaatttaaagtt
gcagcaggacctgatatcatctcacgcggtttcgtttacatgcgtgaaagtagcgattta
atcaatgatgcacaaacattaattacaactcatttagaaaaagtaatggagcgtaaaaca
acacaatggtctgaaattaaaaatgaaattacagacacattagctccattcctatatgag
aaaacgaaacgtcgtccaatgattttaccaatcattatggaaatataa

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