Bacillus cereus ATCC 14579: BC3977
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Entry
BC3977 CDS
T00127
Name
(GenBank) Zn-dependent hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
bce
Bacillus cereus ATCC 14579
Pathway
bce03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BC3977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bce03019
]
BC3977
Messenger RNA biogenesis [BR:
bce03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BC3977
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
DUF4453
Motif
Other DBs
NCBI-ProteinID:
AAP10897
UniProt:
Q819J9
LinkDB
All DBs
Position
3953181..3954848
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AA seq
555 aa
AA seq
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MKFLKNDQVAVFALGGLGEIGKNTYAVQFQDEIIIIDAGIKFPEDELLGIDYVIPDYTYF
VRNEDKIKGLFLPHGHEDHIGGIPYLLRQVNIPIYGGKLAIALIKNKLEEHGLLRKAKLY
EIQEDDVIKFKKTSVSFFRTTHSIPDSYGVVVKTPQGQVVHTGDFKFDFTPVGEPADLTK
MAEIGKDGVLCLLSDSTNSEVPNFTMSERRVGDSIQDIFRKVEGRIIFATFASNIHRLQQ
VVEAAVENNRKVAVFGRSMEAAIEIGQNLGYIRCPKDTFIDASQLNRLPANKVVILCTGS
QGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTISVSRTINMLYRAGADVIHGKL
SNIHTSGHGGQEEQKLMLRLIKPKYFMPIHGEYRMQRMHMNIANDCGIPEENCFIMDNGD
VLALRSDEASVAGKIPSGSVYIDGNGIGDIGNIVLRDRRILSEEGLVIVVVSIDMKEFKV
AAGPDIISRGFVYMRESSDLINDAQTLITTHLEKVMERKTTQWSEIKNEITDTLAPFLYE
KTKRRPMILPIIMEI
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttctaaaaaacgaccaagttgctgtatttgctctcggtgggcttggtgaaatc
ggtaaaaatacatacgctgttcaatttcaagatgaaattattataattgatgctggaatt
aaatttccagaggacgaacttctcggaatcgattatgtaataccagactacacttatttt
gtgcgaaacgaagataaaattaaagggttattccttccacatggtcacgaagatcatatc
ggcggaatcccttacctattacgtcaagtgaacattccaatttacggcggaaaattagca
attgcactcatcaaaaacaaattagaagaacacggcttacttcgtaaagcaaaactttac
gagattcaagaagatgacgttattaaattcaaaaaaacgtctgtatccttcttccgtaca
actcacagtattccagattcgtacggcgttgttgtgaaaacacctcaaggtcaagttgtt
catacaggtgacttcaaatttgacttcacaccagttggtgaaccagctgatttaacaaaa
atggctgaaatcggtaaagatggcgtactatgtctattatctgatagtacgaacagtgaa
gttccaaactttactatgtctgagcgtcgcgttggtgatagcattcaagacattttccgt
aaagtagaaggacggattatatttgcaacctttgcatcaaatattcaccgcttacaacaa
gttgttgaagctgctgttgaaaacaaccgtaaagtagctgtgtttggtcgaagtatggaa
gcagcgattgaaattggacaaaaccttggttatattcgttgcccgaaagatacattcata
gatgcatctcaactaaaccgcttaccagctaataaagttgttattttatgtacaggtagt
caaggtgaaccgatggcagcactttcacgtattgcaaacggtacacaccgccaaattcaa
attattcctggagatacagttgttttctcttcttcaccaattccaggaaatacaattagc
gtaagtcgtacaattaacatgttgtaccgcgctggcgctgatgtaattcatgggaaactt
tcaaatatccatacaagtggacacggtggacaagaagaacaaaagttaatgttacgtcta
attaaaccgaagtacttcatgccaattcatggtgaatatcgtatgcagcgtatgcacatg
aacatagcaaatgattgtggcatccctgaagaaaattgcttcattatggataatggcgat
gttcttgctttacgttcggatgaagctagcgtagctggaaaaatcccatctggttcggtc
tacattgatggaaacggtattggagatattggcaatatcgtattacgcgatcgtcgtatc
ctttctgaagaaggacttgtaattgtagttgtaagcattgatatgaaagaatttaaagtt
gcagcaggacctgatatcatctcacgcggtttcgtttacatgcgtgaaagtagcgattta
atcaatgatgcacaaacattaattacaactcatttagaaaaagtaatggagcgtaaaaca
acacaatggtctgaaattaaaaatgaaattacagacacattagctccattcctatatgag
aaaacgaaacgtcgtccaatgattttaccaatcattatggaaatataa
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