Burkholderia cepacia DDS 7H-2: DM42_1144
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Entry
DM42_1144 CDS
T03302
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
bced
Burkholderia cepacia DDS 7H-2
Pathway
bced04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
bced00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
DM42_1144 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bced03016
]
DM42_1144 (trmU)
Enzymes [BR:
bced01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
DM42_1144 (trmU)
Transfer RNA biogenesis [BR:
bced03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
DM42_1144 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
NAD_synthase
QueC
ThiI
Arginosuc_synth
Asn_synthase
DUF7411
Motif
Other DBs
NCBI-ProteinID:
AIO49616
LinkDB
All DBs
Position
1:1263664..1264839
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AA seq
391 aa
AA seq
DB search
MSKRRVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDGEYCSTRQDWIDVVSVA
DLIGIDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMSLDAEM
IATGHYARVRERDGRFELLKAFDHTKDQSYFLHRLNQAQLSKTMFPLGEIPKTKVREIAA
QIGLPNAKKKDSTGICFIGERPFRDFLNRYLPTKPGPMKTPDGKVVGEHIGLAFYTFGQR
KGIGLGGSKSGSGEPWFVAAKDIASNTLYVVQGHDHPWLLSRELVAGNVSWVAGEPPADG
FACGAKTRYRQADAACVFGRAATGAEAAGPAGEARFSLAFDDAQWAVTPGQSAVLYDGEI
CLGGGIIESAATGQPGQATSAGHAPALAEAR
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcgccgtgtagtggtgggcatgtcgggcggcgtcgattcgtcggtgaccgcg
tggctgctgaaggaacagggctacgacgtggtcggcctgttcatgaagaactgggaagac
gacgacgacggcgagtactgctcgacgcgccaggactggatcgacgtcgtgtcggtggcc
gacctgatcggcatcgacgtggaagccgtcaacttcgccgcggaatacaaggaccgcgta
ttcgccgagttcctgcgcgaatactcggccggccgcacgccgaaccccgacgtgctgtgc
aatgccgagatcaagttcaaggcattcctcgaccacgcgatgtcgctcgacgcggaaatg
atcgctaccggtcactacgcacgcgtgcgcgaacgcgacgggcgtttcgaactgctgaag
gctttcgatcatacgaaagaccagtcgtacttcctgcaccggctgaaccaggcgcaactg
tcgaagacgatgttcccgctcggcgagatcccgaagacgaaggtgcgcgagatcgccgcg
cagatcgggctgccgaatgcgaagaagaaggattcgaccggcatctgcttcatcggcgaa
cggccgttccgcgatttcctgaatcgctacctgccgaccaagccgggcccgatgaagacg
cccgacggcaaggtggtcggcgagcacatcggcctcgcgttctatacgttcggccagcgc
aagggcatcggcctcggcggcagcaagagcggcagcggcgagccgtggttcgtcgccgcg
aaggacatcgcgtcgaacacgctgtacgtcgtgcagggccacgatcatccgtggctgctg
tcgcgcgagctcgtcgccggcaacgtgagctgggtcgccggcgagccgccggccgacggc
ttcgcgtgcggcgcgaagacgcgctaccggcaggccgacgcggcgtgcgtattcgggcgg
gccgcgacaggcgccgaggccgccggcccggcaggcgaagcgcgcttctcgctcgcgttc
gacgacgcgcagtgggccgtcacgcccggccagtcggccgtgctgtacgacggcgagatc
tgcctcggcggcggcatcatcgaatccgcggccaccggccagcccggtcaggccacgtcg
gcgggccacgcgccggcactcgccgaagcacgctga
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