Burkholderia cepacia DDS 7H-2: DM42_1187
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Entry
DM42_1187 CDS
T03302
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bced
Burkholderia cepacia DDS 7H-2
Pathway
bced03030
DNA replication
bced03430
Mismatch repair
bced03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bced00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DM42_1187 (holA)
03430 Mismatch repair
DM42_1187 (holA)
03440 Homologous recombination
DM42_1187 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bced03032
]
DM42_1187 (holA)
03400 DNA repair and recombination proteins [BR:
bced03400
]
DM42_1187 (holA)
Enzymes [BR:
bced01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DM42_1187 (holA)
DNA replication proteins [BR:
bced03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DM42_1187 (holA)
DNA repair and recombination proteins [BR:
bced03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DM42_1187 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
AIO47543
LinkDB
All DBs
Position
1:complement(1314023..1315117)
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AA seq
364 aa
AA seq
DB search
MQLRLDALEPHLAKGLAGLYTVYGDEPLLAQEACDRIRAAARAAGFTERSVHTVERGFDW
SVLLGATQAMSLFGERQLIELRIPSGKPGKEGADALKTLAATPNPDALMLVTLPRLDAAT
QKSAWFTALQNGGVALKIDPVDRAQLPNWIGQRLAMQGQRAAPGEDGRRALQFIAERVEG
NLLAAHQEIQKLGLLYPQGALSFEQVHDAVLNVARYDVFKLNEAMLAGDAARLARMIDGL
KGEGEAIVLVMWAVVEELRTLLRIKRGTTAGKPLATLLRENRVWGPRERLIAPALNRVSE
AVLEKALAFAAKLDRQVKGLTAVTPGRRTQDEPPPDPWDGLFQLAMTVAGARGERPPTAG
RVRR
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgcgacttgatgcgctggagccgcacctcgcgaaggggttggccgggctttat
accgtctacggcgacgagccgctgctcgcgcaggaagcgtgcgaccgcattcgtgcggcc
gcacgcgcggccggcttcaccgagcggtcggtgcatacggtcgagcgcggcttcgactgg
agcgtgctgctcggcgcgacccaggcgatgtcgctgttcggcgagcgccagctgatcgaa
ctgcgcattccgtcgggcaagcccggcaaggaaggcgccgacgcgctgaagacgctcgcg
gccacgcccaaccccgacgcgctgatgctcgtcacgttgccgcgcctcgacgcggccacg
cagaaatccgcatggtttaccgcgctgcagaacggcggcgtcgcgctgaagatcgatccg
gtcgaccgtgcgcaactgccgaactggatcggccagcgactcgcgatgcagggccagcgc
gccgcgcccggcgaggacgggcggcgcgcgctgcagttcatcgcggagcgcgtcgagggc
aacctgctcgccgcgcaccaggaaatccagaagcttgggctgctgtatccgcagggcgcg
ctgtcgttcgagcaggtgcacgacgcggtgctgaacgtcgcgcgctacgacgtgttcaag
ctgaacgaagcgatgctcgccggcgacgccgcgcggctcgcgcggatgatcgacgggctg
aaaggcgagggcgaggcgatcgtgctcgtgatgtgggccgtcgtcgaggagttgcgcacg
ctgctgcggatcaagcgcggcacgacggccggcaagccgctcgcgacgctgctgcgcgag
aaccgtgtgtgggggccgcgcgagcggctgatcgcgcccgcgctgaaccgcgtgtcggag
gcggtgctcgaaaaggcgctcgcgttcgccgcgaagctcgaccggcaggtcaaggggctg
acggccgtcacgccgggccgccgcacgcaggacgaaccgccgcccgatccgtgggacggg
ctgttccagctcgcgatgacggtcgcgggcgcccgcggcgagcgaccgccgaccgcgggt
cgcgtgcgacgctaa
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