Burkholderia cepacia DDS 7H-2: DM42_1249
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Entry
DM42_1249 CDS
T03302
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
bced
Burkholderia cepacia DDS 7H-2
Pathway
bced02024
Quorum sensing
bced03060
Protein export
bced03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
bced00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
DM42_1249 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
DM42_1249 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DM42_1249 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
bced02044
]
DM42_1249 (ffh)
Enzymes [BR:
bced01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
DM42_1249 (ffh)
Secretion system [BR:
bced02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
DM42_1249 (ffh)
Eukaryotic Sec-SRP protein
DM42_1249 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
Zeta_toxin
cobW
AAA_16
AAA_31
AAA_30
YqeC
AAA_33
T2SSE
APS_kinase
Rad17
AAA_14
Mg_chelatase
Helicase_RecD
TsaE
ResIII
AAA_18
NACHT
AAA_19
Thymidylate_kin
Motif
Other DBs
NCBI-ProteinID:
AIO49011
LinkDB
All DBs
Position
1:1379836..1381203
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AA seq
455 aa
AA seq
DB search
MLDNLTQRMARVVKTLRGEARLTEANTQEMLREVRLALLEADVSLPVVREFIAKVKEKAL
GEEVISSLSPGQALVGVVQKELTAVIGGDYEGKAAELNLAVTPPAVILMAGLQGAGKTTT
VGKLAKLLREKYKKKVLTVSCDVYRPAAIMQLKTVTEQVGADFFPSTPDQKPVDIALAAV
DWAKRHYHDVLLVDTAGRLGIDEAMMQEIAALHGTLKPAETLFVVDAMLGQDAVNTAKAF
NDTLPLTGVVLTKLDGDSRGGAALSVRHVTGKPIKFVGVAEKLDGLEVFHPDRMANRILG
MGDILALVEEAQRGVDVQAAQKLADKVKKGGDFDLNDFRAQISQMKNMGGLSSLMDKLPA
QFQQAAAGADMGQAEKSIRRMEGIISSMTPAERAKPEIIKATRKRRIAAGAGVPVQEVNR
MLNQYDQMRTMMKKLKGGNMQKMMRGLKGMMPGMR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacaatctcactcaacggatggcgcgcgtcgtcaagacgctgcgcggcgaggcc
cggctcaccgaggcaaacacgcaggagatgctccgcgaggtgcgtctcgcgctgctggaa
gccgacgtgtcgctgccggtcgttcgcgaattcatcgccaaggtcaaggaaaaggcgctc
ggcgaagaagtgatcagcagcctgtcgccgggccaggcgctcgtcggcgtggtccagaag
gaactgaccgccgtgatcggcggcgactacgaaggcaaggccgccgagctgaacctcgcg
gtcacgccacccgccgtgatcctgatggccggcctgcagggcgcgggcaagaccacgacc
gtcggcaagctcgcgaagctgctgcgcgagaagtacaagaagaaggtgctgaccgtgtcg
tgcgacgtgtatcgcccggctgcgatcatgcagctgaaaacggtgaccgagcaggtcggc
gccgacttcttcccgtccacgccggaccagaagcccgtcgacatcgcgctcgccgccgtc
gactgggcgaagcgccactaccatgacgtgctgctcgtcgacacggccggccgcctcggc
atcgacgaggcgatgatgcaggaaatcgccgcgctgcacggcacgctgaagccggccgaa
acgctgttcgtcgtcgacgcgatgctcggccaggacgcggtcaacaccgcgaaggcgttc
aacgacacgctgccgctcaccggcgtcgtgctgaccaagctcgacggcgactcgcgcggc
ggcgccgcgctgtcggtgcgtcacgtcacgggcaagccgatcaagttcgtcggcgtcgcc
gagaagctcgacggcctcgaggtgttccaccccgaccggatggcgaaccggatcctcggc
atgggcgacatcctcgcgctcgtcgaggaggcgcagcgcggcgtcgatgtccaggccgcg
cagaagctcgccgacaaggtcaagaaaggcggcgatttcgacctgaacgatttccgcgcg
cagatctcgcagatgaagaacatgggcggcctgtcgtcgctgatggataagctccccgcg
cagttccagcaggcggcggccggcgccgacatgggccaggccgagaagtcgatccgccgg
atggaagggatcatcagctcgatgacgcccgccgagcgcgctaaacccgaaatcatcaag
gcgacgcgcaagcgccgcattgcagccggcgcgggcgtgccggtgcaggaagtcaaccgg
atgctgaaccagtacgaccagatgcgtacgatgatgaagaagctgaagggcggcaacatg
cagaagatgatgcgcggcctgaagggcatgatgcccggcatgcgctga
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