Burkholderia cepacia DDS 7H-2: DM42_1447
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Entry
DM42_1447 CDS
T03302
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bced
Burkholderia cepacia DDS 7H-2
Pathway
bced03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bced00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DM42_1447 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bced03021
]
DM42_1447 (rpoA)
03400 DNA repair and recombination proteins [BR:
bced03400
]
DM42_1447 (rpoA)
Enzymes [BR:
bced01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DM42_1447 (rpoA)
Transcription machinery [BR:
bced03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DM42_1447 (rpoA)
DNA repair and recombination proteins [BR:
bced03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DM42_1447 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AIO48538
UniProt:
A0A081V0W0
LinkDB
All DBs
Position
1:complement(1588940..1589917)
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AA seq
325 aa
AA seq
DB search
MQTSLLKPKIIAVESLGENHARVVMEPFERGYGHTLGNALRRVLLSSMVGYAPTEVTIAG
VVHEYSTLDGVQEDVVNLLLNLKGVVFKLHNRDEVTVTLRKEGEGVVTAGDIELAHDCEV
INPNHVIAHLSKGGKLDVQIKIEKGRGYVPGNVRRYGEDTAKIIGRIVLDASFSPVRRVS
YAVESARVEQRTDLDKLVMNIETSGVITPEEAIRQSARILVDQLSVFAALEGTETAAEAP
SRAPQIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEI
KEVLASRGLTLGMKLENWPPAGLDK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccagtttgctgaaacccaagatcatcgccgtggaatcgctgggcgagaaccac
gcgagggtggtcatggaaccgttcgaacgcggttacggccacaccttgggcaatgcgctt
cgccgcgtgctgctatcgtcgatggtaggctacgcgccgaccgaagtcacgatcgcaggc
gtggtgcacgagtactcgacgctggatggcgtgcaggaagacgtcgtcaacctgctgctg
aacctgaagggcgtggtgttcaagctgcataaccgtgacgaagtgacggttacgctgcgc
aaggaaggcgaaggcgtcgtgacggccggcgatatcgagctggctcacgattgcgaagtc
atcaacccgaatcacgtgattgcgcacctgtcgaagggtggcaagctcgacgttcagatc
aagatcgaaaagggtcgcggctacgtgcccggcaacgtccgtcgctacggcgaagacacg
gccaagatcatcggccgcatcgtcctcgacgcctcgttctcgccggttcgccgcgtgagc
tacgcggttgaaagcgcacgtgtcgagcagcgtaccgacctcgacaagctcgtgatgaac
atcgagacgagcggcgtgatcacgccggaagaagcgatccgccagtcggcccgcatcctg
gtcgaccagctgtccgtgttcgcggcgctggaaggcacggaaacggcagccgaagcgccg
tcgcgtgcaccgcagatcgatccgatcctgctgcgtccggtggacgatctcgagttgacg
gttcgttcggcgaactgcctgaaggccgagaacatctactacatcggcgatctgatccag
cgcacggaaaacgagctgctgaagacgccgaacctcggtcgcaagtcgctcaacgagatc
aaggaagtgctcgcttcgcgcggtctcacgctgggcatgaagctcgagaactggccgccg
gctggtctcgacaagtaa
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