Burkholderia cepacia DDS 7H-2: DM42_1927
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Entry
DM42_1927 CDS
T03302
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
bced
Burkholderia cepacia DDS 7H-2
Pathway
bced00300
Lysine biosynthesis
bced00470
D-Amino acid metabolism
bced01100
Metabolic pathways
bced01110
Biosynthesis of secondary metabolites
bced01120
Microbial metabolism in diverse environments
bced01230
Biosynthesis of amino acids
Module
bced_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bced00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DM42_1927 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DM42_1927 (dapF)
Enzymes [BR:
bced01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
DM42_1927 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CitF
Motif
Other DBs
NCBI-ProteinID:
AIO50093
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Position
1:complement(2091436..2092305)
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AA seq
289 aa
AA seq
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MKLSFTKMHGAGNDFVVLDGYSRALPPLTDAQVRALANRHFGIGADQLLLVEKPTVDGAD
FKYRIFNCDGGEVEHCGNGARCFVKFVSDRGLTDKRSVRVQVMKGLITLTLQDNGEVVVD
MGAPVFAPAQVPFDAAGLDGRHEGRDTLWPLDVGGATRWISTVSMGNPHAVQVVDDAEAY
PVLEEGPLIERHARFPQRVNAGFMQIVSRREVKLRVYERGAGETLACGTGACAAVAAGIR
RGLLDSPVTVHTHGGTLTIGWDGARDEAAALMMAGPATTVFEGEIDLNA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
gtgaaactctcgttcaccaagatgcacggcgcgggcaacgacttcgtcgtgctcgacggc
tattcgcgcgcgctgccgccgctcaccgacgcgcaggtgcgcgcactcgccaatcgccat
ttcggcatcggcgccgaccagttgctgctggtcgagaaaccgaccgtcgacggcgcggat
ttcaagtaccggatcttcaattgcgacggcggcgaggtcgagcactgcggcaacggcgcg
cgttgtttcgtgaagttcgtcagcgaccgcggcctgaccgacaagcgcagcgtgcgcgtg
caggtcatgaagggcctgatcacgctgacgctgcaggacaacggcgaagtcgtcgtcgac
atgggcgcgcccgtgttcgcgccggcgcaggtgccgttcgacgcagcggggctcgacggc
cgtcacgaaggccgcgacacgctgtggccgctcgacgtcggcggcgcgacgcgctggatc
tcgacggtgtcgatgggcaatccgcacgccgtgcaggtcgtcgacgatgccgaagcgtat
ccggtgctggaagaaggcccgctgatcgagcgtcatgcgcgcttcccgcagcgcgtgaac
gccggcttcatgcagatcgtgtcgcgccgcgaagtgaagctgcgcgtgtacgaacgcggc
gcgggcgagacgctcgcgtgcggcaccggcgcatgcgcggcggtcgcggccggcatccgg
cgcggcctgctcgattcgcccgtgaccgtgcacacgcacggcggcacgctgacgatcggc
tgggacggcgcgcgcgacgaagccgccgcgctgatgatggccggccccgccacgaccgtg
ttcgaaggcgagatcgacctgaacgcctga
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