Burkholderia cepacia DDS 7H-2: DM42_1975
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Entry
DM42_1975 CDS
T03302
Name
(GenBank) transglycosylase SLT domain protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
bced
Burkholderia cepacia DDS 7H-2
Brite
KEGG Orthology (KO) [BR:
bced00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bced01011
]
DM42_1975
Enzymes [BR:
bced01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
DM42_1975
Peptidoglycan biosynthesis and degradation proteins [BR:
bced01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
DM42_1975
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Motif
Other DBs
NCBI-ProteinID:
AIO46911
LinkDB
All DBs
Position
1:2141104..2143056
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AA seq
650 aa
AA seq
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MSNSLFRVYRAVALALSAAALVAGTVACAAPNDDTLAGDDQIFVQLREAARRNDAAKAAQ
LASMIPNYPVPSYVEYFQIKPQLFDSTGRARVDAPDAPVQSFLQRYDGQAIADRLRNDYL
LVLGARHDWRNFDDQYKRFVLDDDTQVKCYALESRAARNENVADAARALLVEPKNYGDAC
VDLITALTVNQQFTSDDVWQQARLAYEQNYTTLGGKIVDALGPRPVGFDQATSAPPLYLA
RGVGPDAASHQLALIALGRMARNDPDAAAGMLTTVAPSLTKQEQAIAWGAIGYQGAIKRS
PMASVWYAKSANAPLSNPGYEWRTRAALLAGNWPMVRWSIEQMPPSLRNDPAWIYWHARA
LKQSGDTLQANQEFEQVAGQFNFYGQLAGEELGQRTTIPPRTKVSDAEIDAMGKIPGFAL
AQRFYALNLRLEGNREWNWPLRGMTDRQLLAAAEYGKRVELLDRTVNTADRTKAEHDFTL
RYPSPYRTTVERYAQSTGLDVEWAYGLIRQESRFIISARSSVGAGGLMQLMPATAQMVAK
KLGMGTISRAQMHDIDTNIQLGTWYLADIYNNFDSSPVLATAGYNAGPGRPRQWRQVLTQ
PVEGAIFAETIPFNETRDYVKNVLSNTVYYAALFEGKPQSLKKRLGMISP
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacagccttttccgagtatatcgcgcggtcgcgctggcgctttcggccgccgcg
ctcgtcgcgggcacggtcgcatgtgccgcaccgaacgacgacacgctcgccggggatgac
cagatcttcgtgcagcttcgcgaagccgcacgccgcaacgacgccgcgaaggccgcgcag
ctcgcgtcgatgatcccgaactatccggtgccgtcctacgtcgagtatttccagatcaag
ccgcagctgttcgattcgaccggccgcgcgcgcgtcgatgcgccggacgcgcccgtgcag
tcgttcctgcagcgctacgacggccaggcgatcgccgatcgcctgcgcaacgactacctg
ctcgtgctcggcgcgcgccacgactggcgcaatttcgacgaccagtacaagcgtttcgtg
ctcgacgacgacacgcaggtcaagtgctatgcgctcgaatcgcgcgcggcgcgcaacgag
aacgtcgccgatgcggcgcgcgcgctgctcgtcgagccgaagaactacggcgatgcatgc
gtcgacctgatcaccgcgctcaccgtcaaccagcaattcacgagcgacgacgtgtggcag
caggcgcgcctcgcgtacgagcagaactacacgacgctcggcggcaagatcgtcgacgcg
ctcggtcctcgcccggtcggcttcgaccaggcgacgagcgcgccgccgctgtatctcgcg
cgcggcgtcgggcccgacgccgcgtcgcatcagctcgcgctgatcgcgctcggccgcatg
gcgcgcaacgatccggacgccgccgccgggatgctgacgacggtcgcgccttcgctcacc
aagcaggaacaggcgatcgcgtggggcgcgatcggctaccagggcgcgatcaagcgctcg
ccgatggcatcggtctggtatgcgaaatcggcgaacgcgccgctgtcgaacccgggctac
gaatggcgcacgcgcgccgcgctgctcgccggcaactggccgatggtgcgctggtcgatc
gagcagatgccgccgtcgctgcgcaacgatccggcgtggatctactggcatgcgcgcgcg
ctcaagcagagcggcgacacgctgcaggcgaaccaggaattcgagcaagtcgccggccag
ttcaacttctacgggcagttggccggcgaagagctcggccagcgcacgacgatcccgccg
cgcacgaaggtgagcgacgccgagatcgacgcgatgggcaagatcccgggcttcgcgctc
gcgcagcgcttctacgcgctgaacctgcgcctcgaaggcaatcgcgaatggaactggccg
ctgcgcgggatgaccgatcgccagttgctcgcggccgccgaatacggcaagcgcgtcgag
ctgctcgaccgcacggtcaacaccgccgaccgcacgaaggccgagcacgacttcacgctg
cgctatccgtcgccgtaccgcacgaccgtcgagcgctatgcgcagtcgacgggccttgac
gtcgagtgggcgtacgggctcatccgccaggaatcgcgcttcatcatcagcgcgcgttcg
tcggtcggcgcgggcggcctgatgcagctgatgccggcgacggcccagatggtcgcgaag
aagctcggcatgggcacgatctcgcgggcgcagatgcacgacatcgataccaacatccag
ctcggcacctggtatctggcagacatctacaacaacttcgacagctcgccggtgctcgcc
acggccggctacaacgcgggcccgggccggccgcgccagtggcgccaggtgttgacgcag
ccggtcgaaggcgcgatcttcgcggagacgattccgttcaacgagacgcgcgactacgtg
aagaacgtgctgtcgaacaccgtctactacgcggcgctcttcgagggcaaaccgcagtcg
ttgaagaaacgtctaggcatgatctcgccctga
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