Burkholderia cepacia DDS 7H-2: DM42_2056
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Entry
DM42_2056 CDS
T03302
Name
(GenBank) type IV secretory system Conjugative DNA transfer family protein
Organism
bced
Burkholderia cepacia DDS 7H-2
Pathway
bced03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
bced00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
DM42_2056
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Paralog
Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
AIO48269
LinkDB
All DBs
Position
1:complement(2223809..2225839)
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AA seq
676 aa
AA seq
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MQGTNVLFGQIAVVFGIVIAGVWSATQWTAAALGYQLRLGSPWFDFLGTPVYHPWRLFEW
WFFFDAYAPHVFDVGGVIAAGSGLFAVLVAIGMSIWRSRQSKLVTTYGSARWANAEDIHK
AGLDQSAGVFLGLHRQQYLRHEGPEHVLTFAPTRSGKGVGLVVPTLLSWPASAVIHDIKG
ENWSITAGWRSRFSHCLLFNPTDSQSAAYNPLLEVRRGGHEVRDVQNIADILVDPEGALE
RRNHWEKTSHALLVGAILHVLYAGEDKTLRGVANFLSDPACPFDLTLHRMMTTPHLVNEE
GGGPHPVVASAAREVLNKSDNERSGVLSTAMSFLGLYRDPTVAEVTSRCDWRIADLIAAE
HPVSLYLVVPPSDISRTKPLIRLILNQIGRRLTESLDGSDGIERRHKLLLMLDEFPALGR
LDFFETALAFMAGYGIRSFLIAQSLNQIDKAYGQNHSILDNCHVRVTFATNDERTAKRIS
ETLGTATELRAQRNYAGHRLAPWLGHLMVSRQETARPLLTAGEVMQLPPDEAVVMVSSVA
PIKARKLRYYADANFKRRVLPPPVLAAGRYADVPPARADDWSGLAIPAVPVAPAAASADG
LEHLGSTDDGGPRRQPELSETVAYDPDLVAPAADLGLLDDDDMPLPLSVSLPRQLDPALQ
RTARLASLDPDDGIAL
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgcaagggacgaacgtgctgttcggtcagattgccgtcgtattcggcatcgtgatcgcc
ggagtgtggagcgccacgcaatggacggcagcggctctggggtaccagctacgcctggga
tcgccgtggttcgatttcctcggcacgccggtctatcacccgtggcgcctgttcgagtgg
tggttcttcttcgatgcctacgcgccgcatgtcttcgacgtgggcggggtcattgcagcg
ggcagtggcctgttcgcggtgctggtcgccatcggcatgtcgatctggcgctcgcgccag
tccaagctggtcacgacctatggctctgcgcgctgggccaacgcggaggacattcacaaa
gcgggccttgaccagtccgcgggcgtgttcctcggcctgcatcgccagcagtacctgcgc
catgaaggcccggaacacgtcctgaccttcgcgcccacccgctcgggcaagggtgtgggc
ctagtggtgccgaccctgctgtcgtggcccgcatccgccgtcatccacgacatcaagggc
gagaactggagcattaccgcaggttggcgttcgcgcttctcgcactgcctgctgttcaac
ccgacggatagccagtcggcggcctacaacccgctgctcgaagtgcggcgcggcgggcat
gaggtgcgcgacgtgcagaacatcgcggacatcctggtcgatccagaaggcgcactggag
cggcgcaaccactgggagaagacttcgcatgcgctgctggttggagccatcctgcatgtg
ctctacgcgggcgaagacaagacgctgcgcggcgtggcgaacttcctttccgatcctgcc
tgcccattcgatctgaccttgcaccgcatgatgaccacgccccacctcgtgaatgaggag
ggtggtggcccgcatccggtggtggcttcagcggcgcgcgaagtgctcaacaagagcgac
aacgagcgctcgggcgtgctgtccacggccatgtcgttcttgggcctctaccgcgaccct
acggtggccgaagtcacgtcgcgctgcgactggcgcatcgctgacctgatcgcggccgag
catccggtgtcgctgtacttggtggtgccgccttcggacatttcgcggacgaagccgctg
atccgcctgatcctcaaccagatcgggcgacgcctcaccgaatcgcttgacggctccgat
ggcatcgagcgccgccacaagctgctgctgatgctcgatgaattccccgcgctcgggcgg
ctggatttcttcgagacggcgctggccttcatggcgggctacggcatccgcagcttcctg
atcgcgcagagcctgaaccagatcgataaggcctacggccagaaccattcgatcctggac
aactgccatgtgcgcgtgaccttcgccaccaacgatgagcgcaccgccaagcggatatcc
gagacactgggaaccgccaccgaactgcgcgcgcagcgcaactatgccggccatcggctc
gcgccctggctggggcacctcatggtgtcacggcaggagacagcccgcccgctgctgacg
gccggcgaagtcatgcagctaccgcccgacgaggcggtggtgatggtctccagcgtggcg
ccgatcaaggccaggaagctgcgctactacgcggacgccaacttcaagcgacgggtgctg
ccgccgccggtgctcgccgcggggcgctatgccgacgtgccgccggcccgtgcggatgac
tggagtgggctggcgattcccgccgtgcccgtcgcaccggccgcggcatcggccgatggc
ctggagcacctgggttcgaccgatgacggcggcccgcgccgtcagcccgaactctccgag
accgtcgcctacgaccccgacctggttgcgcccgcagccgacctcgggctgctcgatgac
gacgacatgcctttgcctctttcggtctccctcccgcgccagctcgacccggccctgcag
cgcacggcccggctggcatccctcgaccctgacgacggaatcgcgctatga
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