Burkholderia cepacia DDS 7H-2: DM42_258
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Entry
DM42_258 CDS
T03302
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bced
Burkholderia cepacia DDS 7H-2
Pathway
bced03420
Nucleotide excision repair
bced03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bced00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DM42_258
03430 Mismatch repair
DM42_258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bced03400
]
DM42_258
Enzymes [BR:
bced01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DM42_258
DNA repair and recombination proteins [BR:
bced03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DM42_258
MMR (mismatch excision repair)
Other MMR factors
DM42_258
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
AAA_11
DUF8203
RecC_4th
Motif
Other DBs
NCBI-ProteinID:
AIO49045
LinkDB
All DBs
Position
1:complement(287142..289505)
Genome browser
AA seq
787 aa
AA seq
DB search
MPDLLANLNPEQLAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQQGYASPPTVLAVTF
TNKAAREMMARLSAMMPIDTRGMWIGTFHGLCNRMLRTHWRDAGLPQTFQILDTADQLSA
IKRLMKAANVDDEKYPPKNVQYFINNAKEQGLRPDKVDATDNFNRKFVELYQAYDQQCQR
EGVVDFPELLLRCYELLAYNAPLRAHYQARFRHILVDEFQDTNKLQYAWLKMLAGGENAI
FAVGDDDQSIYAFRGANVGNMRDFEDEFRVRNLIKLEQNYRSHGNILDAANQLISNNAHR
LGKNLRTDAGHGEPVRVYEASTDSQEAGWIVEEIRSLINTGMARSEVAVLYRSNAQSRSI
EHTLMSSGIPYRVYGGLRFFERQEVKHALAYLRLIDNPNDDTAFARVVNFPTRGIGARSI
EQLADAARLYGCSMAAAIPYVTGKAGTSLGGFANLIAKMRADTQHMNLPDTVEHIVRASG
LADFYQGEREGQDRLENLQELVNAATAFIAEEGYGLDTPARSIPLRAGAIAAPELGTATD
DPAVDVLDPASPADPAQNPDTMTPLAGFLSHASLEAGDNQAQAGQDAVQLMTVHAAKGLE
FSAVFITGLEEGLFPHENSVLESDGLEEERRLMYVAITRAKERLYLSFAQSRMLHGQTRY
NVRSRFFDELPEHVLKWLTPKVEAGSRWGGRSDNAGYGRDWFARPGGGSREQIVDAAVSA
PLPAFADKQRAADAGFRVGQQVFHTKFGEGTVTALEGNGTDAKAQVKFKRHGEKWLALAV
AKLQAVE
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatctgctcgccaatctgaaccccgaacaactcgccgccgtcacgttgccgaac
gaaccggcgctgatcctcgcaggggctggcagcggcaagacccgcgtgctgatcacgcgc
atcgcttggttgatccagcagggctatgcatcgccgcccaccgtgctcgccgtcaccttc
acgaacaaggccgcgcgcgagatgatggcgcgcctgtcggcgatgatgccgatcgacacg
cgcgggatgtggatcggcacgttccacggcctgtgcaaccggatgctgcgtacgcactgg
cgcgacgccggcctgccgcagaccttccagatcctcgacacggccgaccagctgtccgcg
atcaagcggctgatgaaggcggcgaacgtcgacgacgaaaagtatccgccgaagaacgtc
cagtacttcatcaacaacgcgaaggagcaggggctgcgcccggacaaggtcgacgcgacc
gacaacttcaaccgcaagttcgtcgagctgtaccaggcgtacgaccagcagtgccagcgc
gaaggcgtcgtcgatttccccgagctgctgctgcgctgctacgagctgctcgcgtacaac
gcgccgctgcgcgcgcactatcaggcgcgcttccggcacatcctcgtcgacgagttccag
gacaccaacaagctgcagtacgcgtggctcaagatgctcgcgggcggcgagaacgcgatc
ttcgcggtcggcgacgacgaccagtcgatctacgcgttccgcggcgcgaacgtcggcaac
atgcgcgacttcgaagacgaattccgcgtgcgcaacctgatcaagctcgagcagaattac
cggtcgcacggcaacatcctcgacgcggcgaaccagttgatctcgaacaacgcgcaccgc
ctcggcaagaacctgcgcaccgacgccggccacggcgaaccggtgcgcgtgtacgaagcc
agcaccgattcgcaggaggccggctggatcgtcgaggagatccgctcgctgatcaatacc
gggatggcgcgcagcgaagtggccgtcctgtaccgcagcaacgcgcagtcgcgctcgatc
gagcacacgctgatgtcgtcgggcattccgtaccgcgtgtacggcggcctgcgctttttc
gagcggcaggaagtgaagcacgcgctcgcgtacctgcgcctgatcgacaacccgaacgac
gacacggcattcgcgcgcgtcgtgaatttcccgacgcgcggcatcggtgcgcgctcgatc
gagcaactggccgacgccgcgcgcctgtacggctgctcgatggccgcggcgattccgtac
gtgaccggcaaggccggcacgagcctcggcgggttcgcgaacctgatcgcgaagatgcgc
gccgacacgcagcacatgaacctgcccgacaccgtcgagcacatcgtacgcgcgagcggt
ctcgccgatttctaccagggcgagcgcgaagggcaggatcgtctcgagaacttgcaggaa
ctcgtgaacgcggccaccgcgttcatcgccgaggaaggctacgggctcgacacgccggcc
cgctcgatcccgctgcgcgcgggggcgatcgcggcgcccgaactcggcaccgcgacggac
gatccggcggtcgacgtgctcgatcccgcctcgcccgccgaccctgcacagaaccccgac
acgatgacgccgctcgccggcttcctgtcgcatgcgtcgctggaggccggcgacaaccag
gcgcaggccggccaggacgccgtgcagctgatgacggtgcacgcggcgaaggggctcgag
ttctcggccgtgttcatcacggggctcgaggaagggttgttcccgcacgagaacagcgtg
ctcgaatcggacggcctcgaggaagagcgccggctgatgtacgtcgcgatcacgcgcgcg
aaggagcggctctacctgtcgttcgcgcaaagccggatgctgcatggccagacccgctac
aacgtgcgctcgcgcttcttcgacgagctgcccgagcacgtgttgaagtggctcacgccg
aaggtcgaggccggctcgcgctggggcggacgttcggacaacgccgggtacgggcgcgac
tggttcgcgcggccgggcggcggcagtcgcgagcagatcgtcgacgcggccgtgtccgcg
ccgctgcccgcgttcgcggacaagcagcgcgcggccgacgccggcttccgggtcggccag
caggtgttccataccaagttcggcgaaggcacggtcaccgcgctcgaaggcaacggcacc
gatgcgaaggcgcaggtgaagttcaagcgccacggcgagaaatggctcgcgctggcggtc
gcgaaactgcaggcggtggaatga
DBGET
integrated database retrieval system
