Burkholderia cepacia DDS 7H-2: DM42_2630
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Entry
DM42_2630 CDS
T03302
Name
(GenBank) surface antigen variable number repeat family protein
KO
K07278
translocation and assembly module TamA
Organism
bced
Burkholderia cepacia DDS 7H-2
Brite
KEGG Orthology (KO) [BR:
bced00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bced02000
]
DM42_2630
Transporters [BR:
bced02000
]
Other transporters
Pores ion channels [TC:
1
]
DM42_2630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
POTRA_TamA_1
CFAP143
Motif
Other DBs
NCBI-ProteinID:
AIO47428
LinkDB
All DBs
Position
1:2833271..2835085
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AA seq
604 aa
AA seq
DB search
MAGQSNQQAHTAHDAGPRAARARAGAAARVARAALAGCLAACFAVPAHAKYDVDIDAPRS
IRKLLKTHLDIARFAKRDDISDDQFDFLVTATPQQVRDLAATAGYFSPVVRTDVRTRDGK
RDVRIAVDPGKQTVVSTVDLTFKGPVETEDPKQETATRFAFSMKPGDPFTQSDWDSAKGA
ALRQLQARRYLGAKIASSEARIDPRTQRATLAVTFDSGPTFTIGKVDVDGVRRYPEKIVT
NVNPLSEGEIYDVQRIAELQRQLQNTPYYASVAIDVGDDTSKPERTPVHVKVSEFPYNNI
RGGVGFATDTGPHVQGSYTYLDTFGAAWPLTVSGRLDQIQQYGQVQLSMPPGEKGWTNSV
LASYTNTNVSDTRIYSARVGVQRTRTGQFIDYSYSLMYYQDRLDQNGAGPTTSRALVPQW
AWTRRNVDDPLFPRSGNLIHAEAGFAVKGVLADETFIRGYARGQQYLPIGKRDLFVFRAE
LGGVFTSGSSTGVPASLLFRAGGSNSVRGYGYQSIGNSVDGSVLPTKYLMTGTAEYQHWF
NRDWGAATFFDIGTATDAWGERVFYPGVGVGARWRSPVGPINVDVAYGLRNHSVRPYLTL
GIAF
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
ttggcggggcagtcgaaccagcaagcacacacggcgcatgacgcgggcccgcgcgcggca
cgcgctcgcgccggcgccgcggcccgcgtcgcgcgggcggccctcgcgggttgcctggcc
gcgtgcttcgcggtgccggcccacgcgaagtacgacgtcgacatcgacgcgccgcgctcg
atccgcaagctcctcaagacccatctcgacatcgcgcgcttcgcgaagcgcgacgacatc
agcgacgaccagttcgacttcctcgtgaccgccacgccgcagcaggtgcgcgacctggcc
gcgacggccggctatttctcgccggtcgtgcgcaccgacgtgcgcacgcgcgacggcaag
cgcgacgtgcgcatcgccgtcgacccgggcaagcagaccgtcgtgtcgacggtcgacctg
acgttcaaggggccggtcgagaccgaggatccgaagcaggagaccgccacccgtttcgcg
ttctcgatgaagccgggcgacccgttcacgcagtccgactgggacagcgcgaagggcgcg
gcgctgcggcaactgcaggcgcgccgctatctcggcgcgaagatcgcgtcgtccgaggcg
cgcatcgatccgcgcacgcagcgtgcgacactcgcggtcacgttcgacagcggcccgacg
ttcacgatcggcaaggttgatgtcgacggtgtgcgtcgttatccggaaaagattgtcacg
aacgtcaatccgttgtcggaaggcgagatctacgacgtgcagcggatcgcggaattgcag
cggcagctgcagaacacgccgtactacgcgagcgtcgcgatcgacgtcggcgacgatacg
tcgaagcccgagcgcacgcccgtgcacgtgaaggtcagcgagttcccgtacaacaacatc
cgcggcggcgtcggcttcgccaccgatacggggccgcacgtacaaggctcctatacgtat
ctcgacacgttcggcgccgcgtggccgctgaccgtctcgggccggctcgaccagatccag
cagtacgggcaggtccagctgtcgatgccgccgggcgagaagggctggaccaacagcgtg
ctcgcgtcgtacacgaacaccaacgtgtcggacacccgcatctacagcgcgcgggtcggc
gtgcagcgtacgcgcaccgggcagttcatcgactattcgtattcgctgatgtactaccag
gatcggctcgaccagaacggcgcggggccgaccacgagccgcgcgctcgtgccgcaatgg
gcgtggacccgccgcaacgtcgacgatccgctgtttccgcgctcgggcaacctgattcat
gcggaggccggcttcgcggtcaagggcgtgctggccgacgagaccttcatccgcggctac
gcgcgcgggcagcaatacctgccgatcggcaagcgcgacctgttcgtgttccgcgcggag
ctcggcggcgtgtttacgagcggcagctcgaccggcgtgccggcgtcgctgctgttccgc
gccggcggctcgaactcggtgcgcggctacggctaccagagcatcggcaacagcgtcgac
ggctccgttctgccgaccaagtacctgatgacgggtacggccgaataccagcactggttc
aaccgcgactggggcgccgcgacgttcttcgacatcggcaccgcgaccgatgcgtggggc
gagcgcgtgttctacccgggcgtgggcgtcggtgcgcgctggcgcagcccggtcggcccg
atcaacgtcgacgtcgcgtacggcctgcgcaaccacagcgtgcgcccgtatttgacgctc
ggcatcgctttctga
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