Burkholderia cepacia DDS 7H-2: DM42_2908
Help
Entry
DM42_2908 CDS
T03302
Name
(GenBank) FAD binding domain of DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
bced
Burkholderia cepacia DDS 7H-2
Brite
KEGG Orthology (KO) [BR:
bced00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bced03400
]
DM42_2908
Enzymes [BR:
bced01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
DM42_2908
DNA repair and recombination proteins [BR:
bced03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
DM42_2908
Prokaryotic type
DM42_2908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AIO49736
LinkDB
All DBs
Position
1:3132693..3134171
Genome browser
AA seq
492 aa
AA seq
DB search
MPAQSSVAPAIVWFRDDLRVTDQPALTRAVESGRPLVCVFVDDTGAGAGPALGGAARWWL
HGSLAGLDAALARHGGRLLLLRGDAQREIERLVRDTGAAAVYWNRRYAQPQRDADAALKT
SLKARGVAVESSNGSLLNEPWEVLTGSGGPYQVFTAYWRAARRDRAVAAPLPAPGQIVFH
SWPKAVRDRALALDALALRPHAPDWAGGLRDAWPAPDEAGAHAQLDTFLTTSLAGYADAR
DRPDRPATSRLSPFLRFGNVSPRQVWHAVQGAASAGGAAYAADADKFLSELGWREFSYTL
LYHFPTLATDNFRAQFDAMPWRDDPAALRAWQRGRTGYPLVDAGLRELWTTGWMHNRVRM
VVASFLIKHLLIDWRAGEAWFRDTLVDADPANNAASWQWVAGCGADAAPYFRIFNPVAQG
QKFDPDGAYVRRWVPELAGLDDASIHAPWEASPLALEAAGIRLGIDYPAPLVEHAAARAR
ALDALAALPKRR
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgcccagtcgtccgttgctcccgcgatcgtctggttccgcgacgatctgcgcgtg
accgatcagcccgcgctgacgcgtgcggtcgaatccggccggccgctcgtgtgcgtcttc
gtcgacgacacgggcgccggcgccgggcccgcgctcggcggggcggcgcgctggtggctg
cacgggtcgctggcggggctcgacgccgcgctcgcgcggcatggcgggcgcctgctgctg
ttgcgcggcgacgcgcagcgcgagatcgagcgactcgttcgcgacacgggcgcggcggcc
gtgtactggaaccgccgctatgcgcagccgcagcgcgacgccgacgcggcgctgaagacg
tcgctcaaggcgcgcggcgtggcggtcgagagcagcaacggcagtctgctgaacgagccg
tgggaggtgctgacgggcagcggcggcccgtatcaggtattcaccgcgtactggcgcgcg
gcacgccgcgatcgcgctgtcgccgcgccgctgccggcacccgggcagatcgtgtttcat
tcgtggccgaaggccgtgcgcgaccgcgcgctggcgctcgacgcgctcgcgttgcgtccg
catgcgccggactgggccggcggactgcgcgatgcgtggccggcgcccgacgaagccggt
gcgcatgcacagctcgatacgtttctcacgacatcgctcgccggctatgcggatgcgcgc
gaccgtcccgaccgcccggcgacgagccggctgtcgccgttcctgcgcttcggcaacgtg
tcgcccaggcaggtgtggcatgcggtgcagggcgcggcgagcgcgggcggcgcggcatac
gcggccgatgccgacaagttcctgagcgagctcggctggcgcgaattcagctacacgctg
ctgtatcacttcccgacgctcgcgaccgacaacttccgcgcgcaattcgatgcgatgccg
tggcgcgacgatcccgccgcgttacgtgcatggcagcgcggccggaccggctacccgctc
gtcgatgcgggcctgcgcgagctgtggacgaccggctggatgcacaaccgcgtgcggatg
gtcgtcgcgtcgttcctgatcaagcacctgctgatcgactggcgcgcgggcgaagcatgg
ttccgcgatacgctggtcgacgccgatcccgcgaacaacgcggcgagctggcagtgggtg
gctggctgcggtgccgatgccgcgccgtatttccgcatcttcaatccggtcgcgcagggg
cagaagttcgatccggacggcgcgtacgtacggcgctgggtgcccgagcttgccggcctc
gacgatgcgtcgatccatgcgccgtgggaagcgtcgccgctggcgctcgaagcggccggc
atccggctcggcatcgactatccggcgccgctcgtcgaacacgcggccgcgcgtgcccgt
gcgctcgacgcgctggccgcgttgccgaagcgccgctga
DBGET
integrated database retrieval system
