Burkholderia cepacia DDS 7H-2: DM42_3067
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Entry
DM42_3067 CDS
T03302
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
bced
Burkholderia cepacia DDS 7H-2
Pathway
bced00300
Lysine biosynthesis
bced01100
Metabolic pathways
bced01120
Microbial metabolism in diverse environments
bced01230
Biosynthesis of amino acids
Module
bced_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bced00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DM42_3067 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bced01002
]
DM42_3067 (dapE)
Enzymes [BR:
bced01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
DM42_3067 (dapE)
Peptidases and inhibitors [BR:
bced01002
]
Metallo peptidases
Family M20
DM42_3067 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Nitrate_red_del
Motif
Other DBs
NCBI-ProteinID:
AIO47045
LinkDB
All DBs
Position
1:complement(3309689..3310828)
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AA seq
379 aa
AA seq
DB search
MSATLALTEQLIARASVTPDDQHCQQIMTERLAALGFECETIASHGVTNLWAVKRGTDGR
DGKLLAFAGHTDVVPTGPLEQWTSPPFIPAHRDGKLYGRGAADMKTSLAAFVVASEEFVA
AHPDHRGAIAFLITSDEEGPATDGTVKVVELLQARGERLDYCIVGEPTSTTELGDVVKNG
RRGSMSGELVVKGVQGHIAYPHLAKNPIHLLAPALAELAAEQWDAGNEYFPPTTWQVSNL
HAGTGATNVIPGHADLLFNFRFSTASTVEGLQARVHAILDKHGLEYTLKWSVSGLPFLTP
RGELSGALEHAIRTETGITTELSTTGGTSDGRFIARICPQVIEFGPPNGSIHKIDEHIEV
RFVDPLKNVYRRVLEQLIA
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccaccctagcccttaccgaacagctgatcgcccgcgcgtccgtgacgcccgac
gaccagcactgccagcagatcatgaccgagcgcctcgccgcgctcggcttcgaatgcgag
accatcgcgtcgcacggcgtgaccaacctgtgggccgtcaagcgcggcaccgatggccgc
gacggcaagctgctcgcgttcgcgggccacaccgacgtcgtgccgaccggcccgctcgaa
cagtggacctcgccgccgttcatccccgcccatcgcgacggcaagctgtacggccgcggc
gcggccgacatgaagacgtcgctcgcggcgttcgtcgtcgcgtccgaggaattcgtcgcg
gcccatcccgaccatcgcggcgcgatcgcgttcctgatcacgagcgacgaggaaggcccg
gccaccgacggcaccgtgaaggtcgtcgaactgctgcaggcacgcggcgaacgcctcgac
tactgcatcgtcggtgagccgacgtcgaccaccgagctcggcgacgtcgtcaagaacggc
cgccgcgggtcgatgtccggcgaactggtcgtcaagggcgtgcagggccacatcgcgtat
ccgcacctcgcgaagaacccgatccacctgctcgcgccggcgctcgccgagctcgccgcc
gagcaatgggacgccggcaacgaatacttcccgccgaccacctggcaggtgtcgaacctg
cacgccggcaccggcgcgaccaacgtgatccccggccacgccgacctgctgttcaacttc
cgcttctcgaccgcgagcaccgtcgaaggcctgcaggcccgcgtgcacgcgatcctcgac
aagcacggcctcgaatacacgctgaagtggtcggtgagcggcctgccgttcctcacgccg
cgcggcgaactgtcgggcgcgctggaacacgcgatccgcaccgaaaccggcatcacgacc
gagctgtcgacgacgggcggtacgtcggacggccgcttcatcgcgcgcatctgcccgcag
gtgatcgaattcggcccgccgaacggcagcatccacaagatcgacgagcacatcgaggtg
cgcttcgtcgacccgctgaagaacgtgtaccgacgcgtgctcgaacaactgatcgcctga
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