Burkholderia cepacia DDS 7H-2: DM42_3110
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Entry
DM42_3110 CDS
T03302
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family domain protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bced
Burkholderia cepacia DDS 7H-2
Pathway
bced03030
DNA replication
bced03430
Mismatch repair
bced03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bced00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DM42_3110
03430 Mismatch repair
DM42_3110
03440 Homologous recombination
DM42_3110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bced03032
]
DM42_3110
03400 DNA repair and recombination proteins [BR:
bced03400
]
DM42_3110
Enzymes [BR:
bced01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DM42_3110
DNA replication proteins [BR:
bced03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DM42_3110
DNA repair and recombination proteins [BR:
bced03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DM42_3110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
AIO48935
LinkDB
All DBs
Position
1:complement(3359543..3360160)
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AA seq
205 aa
AA seq
DB search
MQTVAVLDFETTGLSPNLGDRATEIAVILLRDGEVVDRFQSLMNAGRRIPSDIVALTGIT
NDMIAAAPPASEVMKEAAAFVGKHAVVAHNAGFDKRFWQSELGLLGMSADHAFACTMLVA
RRIYPDARSHRLSSLVEMLRLPQSGRAHRAMVDAEMAGHLWCRLQQDISRTYGLDRIDHA
LMSRVQATTKAKVPMYLRSLGRACA
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccgtcgcggtactggacttcgaaaccaccggcctgtcaccgaatctgggcgac
cgtgcgaccgaaattgcggtcatcctgctacgcgacggggaagtcgtagaccgtttccag
agtttgatgaatgccggccgacgcatcccgtccgatatcgttgcgctcaccggcatcacg
aacgacatgatcgcggcggcaccacccgcgtccgaagtcatgaaggaagcggccgcgttc
gtcggcaagcatgcggtcgtggcccacaacgccggtttcgacaagcgcttctggcagtcg
gaactcgggttgctcggcatgtcggccgaccatgcgtttgcgtgcacgatgctggtggcg
agacggatctacccggacgcccggagtcaccgcctgtcgagcctggtcgagatgctgcgg
ctgccgcaatcgggccgtgcgcaccgtgcgatggtcgatgccgagatggctgggcatctg
tggtgccggttgcagcaggatatttcccggacttatgggctggatcggatcgatcacgcg
ctgatgtcgcgggttcaggcgacgaccaaggcgaaggtgccgatgtatttgcggtcgctc
gggcgggcgtgtgcgtga
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