Burkholderia cepacia DDS 7H-2: DM42_3134
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Entry
DM42_3134 CDS
T03302
Name
(GenBank) bacterial regulatory helix-turn-helix , lysR family protein
KO
K18900
LysR family transcriptional regulator, regulator for bpeEF and oprC
Organism
bced
Burkholderia cepacia DDS 7H-2
Module
bced_M00698
Multidrug resistance, efflux pump BpeEF-OprC
Brite
KEGG Orthology (KO) [BR:
bced00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bced03000
]
DM42_3134
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
bced01504
]
DM42_3134
Transcription factors [BR:
bced03000
]
Prokaryotic type
Helix-turn-helix
LysR family
DM42_3134
Antimicrobial resistance genes [BR:
bced01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
DM42_3134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
ExbD
HTH_IclR
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AIO49977
LinkDB
All DBs
Position
1:complement(3380913..3381878)
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AA seq
321 aa
AA seq
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MDRFDAMQAFARVVEAGSFTKAADTLHMSRTTVTQLVQQLEARLRVKLFNRTTRKVVVTA
DGAAYYERVVRLLADMDDAETSLSAASASPRGRLRVDVPSPFARLILIPALPAFHARHPD
IQLDMGVSDRVVNVIGENVDCVVRGGEPTDRSLVARHIGDLRLGVYASPAYLARAGTPSH
PAELDDTHHRVVGFLWARTGKTLPFAMACDGEQVHVRGRYVLAVDDGNAYLAAGLAGLGI
LWLPDYMAAAYRANGELVPLFAQWQLEPMPMYVAFPPNRHVSAKLRVFVDWVAELMTQHA
PVASRRRGGQGSRAMRQSSSI
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggatcgattcgacgcaatgcaggcgttcgcccgcgtggtggaagccggcagcttcacg
aaggcagccgacacgctgcacatgagccgcaccaccgtcacgcaactggtgcagcagctc
gaagcgcggctgcgcgtgaagctgttcaaccgcacgacccgcaaggtcgtcgtcacggcc
gacggcgccgcgtactacgaacgtgtcgtgcggctgctggccgacatggacgatgccgaa
acgagcctgtccgcggcgtcggcgtcgccgcgcgggcggctgcgggtggacgtgccgagc
ccgttcgcgcgcctgatcctgatccccgcgctacccgcgtttcatgcgcgccatccggac
atccagctcgacatgggcgtgagcgaccgcgtggtcaacgtgatcggcgagaacgtcgat
tgcgtcgtgcgcggcggcgagccgaccgaccgctcgctggtcgcgcgccacatcggcgac
ctgcggctcggcgtgtacgcatcgcccgcctatctcgcgcgcgccggtacgccgtcgcat
ccggccgaactggacgacacgcatcatcgcgtcgtcggctttctgtgggcgcgcaccggc
aagacgctgccgttcgcgatggcatgcgacggcgagcaggtccacgtgcgtgggcgctac
gtgctcgcggtcgacgacggcaatgcgtacctcgcagccggcctcgcggggctcggcatc
ctgtggctgcccgactacatggccgccgcgtatcgcgcgaacggcgaactggtgccgctg
ttcgcgcaatggcaactcgaaccgatgccgatgtacgtcgccttcccgccgaaccggcac
gtcagcgcgaagctgcgcgtgttcgtcgactgggtggccgagctgatgacgcagcatgcg
ccggtcgccagccggcggcgcggcggccagggttcgcgcgcgatgcgccagtcctcgtcc
atctga
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