Burkholderia cepacia DDS 7H-2: DM42_3163
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Entry
DM42_3163 CDS
T03302
Symbol
hpnD
Name
(GenBank) squalene synthase HpnD
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
bced
Burkholderia cepacia DDS 7H-2
Pathway
bced00906
Carotenoid biosynthesis
bced01100
Metabolic pathways
bced01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
bced00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
DM42_3163 (hpnD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bced01006
]
DM42_3163 (hpnD)
Enzymes [BR:
bced01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
DM42_3163 (hpnD)
Prenyltransferases [BR:
bced01006
]
Terpene biosynthesis
Squalene/phytoene synthase
DM42_3163 (hpnD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
AIO47272
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All DBs
Position
1:complement(3412294..3413127)
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AA seq
277 aa
AA seq
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MNFDDYCQQKAAPAGSSVYYALRQAPLATQPRLTALFALRRELEETVKETSDPTVGHTKL
AWWHKELAALADGQPSHPVTKALAQHHPAIAAEADALRTLVNGYGMDLEQARYLDFANLQ
RYIAQVGGTFASLVARASSADPTDPQPWAEDVGRALMLAQFVQELGNDARHGRIYLPIDE
LQRYNVTAADLLNRRYSPAFTELLQFQTTRARDALAAAGAAIPAAERRAQRTLRAQIALA
GALLDEIARDGYQVLHQRIALTPIRKLWIAWGAARRR
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
gtgaacttcgacgactactgtcagcaaaaggccgcccccgcaggctccagcgtctactac
gcgctgcgccaggcgccgctcgccacgcagccgcgcctgaccgcgctgttcgcgctgcgc
cgcgaactcgaggaaaccgtcaaggaaaccagtgatccgaccgtcgggcacacgaaactc
gcgtggtggcacaaggaactcgcggcactcgccgacgggcaaccgtcgcacccggtcacg
aaggcgctcgcacagcatcacccggcgatcgccgccgaggccgatgcgctgcgcacgctc
gtcaacggttacgggatggacctcgaacaggcgcgctacctcgacttcgcgaacctgcag
cgctatatcgcgcaggtcggcggcaccttcgcgtcgctggttgcgcgcgccagctcggcg
gacccgaccgacccgcagccgtgggccgaggacgtcggccgcgcgctgatgctcgcgcaa
ttcgtgcaggaactcggcaacgacgcacgccacggccgcatctatctgccgatcgacgaa
ctgcagcgctacaacgtgaccgccgccgatctgctgaaccgtcgctatagcccggccttc
accgaattgctgcaattccagacgacccgcgcgcgcgacgcgctcgcggcggccggtgcg
gcgattcccgccgccgaacgccgtgcacagcgcacgctgcgcgcgcagatcgcgctggcc
ggcgcgctgctcgacgaaatcgcgcgcgacggctaccaggtgctgcaccagcgcattgcg
ctgacgccgatccgcaagctgtggatcgcgtggggcgccgcgcgccgccgctga
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