Burkholderia cepacia DDS 7H-2: DM42_3209
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Entry
DM42_3209 CDS
T03302
Symbol
holB
Name
(GenBank) DNA polymerase III, delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
bced
Burkholderia cepacia DDS 7H-2
Pathway
bced03030
DNA replication
bced03430
Mismatch repair
bced03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bced00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DM42_3209 (holB)
03430 Mismatch repair
DM42_3209 (holB)
03440 Homologous recombination
DM42_3209 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bced03032
]
DM42_3209 (holB)
03400 DNA repair and recombination proteins [BR:
bced03400
]
DM42_3209 (holB)
Enzymes [BR:
bced01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DM42_3209 (holB)
DNA replication proteins [BR:
bced03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DM42_3209 (holB)
DNA repair and recombination proteins [BR:
bced03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DM42_3209 (holB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA_16
NACHT
TsaE
YAcAr
Motif
Other DBs
NCBI-ProteinID:
AIO47835
LinkDB
All DBs
Position
1:3465136..3466164
Genome browser
AA seq
342 aa
AA seq
DB search
MIYPWQTDDWNRLQQLRAQWPHALLLHGQAGIGKLQFAQHLAQGFLCESPQPNGEPCGAC
AACNWFSQGNHPDYRIVLPEALAGEAPGAADDAKPADADEGGKKTRAPSKEIKIEQVRAL
LDFCGVGSHRGGARVVVLYPAEALNVAASNALLKTLEEPPPGVVFLLVSARIDRLLPTII
SRCRQWPMTVPAPEAAAAWLAAQGVDQASALLAEAGGAPLAALALASDENRPLRDYTLGQ
LAAGAACDPFACGETLQKLPVPLVLGWLQRWLYDVLAQRMAGAPRYFPMHAAALARCAEA
VDANAFARFMKAVTRQRTVENHPLNARLVFEELFLGYREMFA
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgatctatccgtggcaaaccgacgactggaaccgcctgcagcaactgcgcgcgcaatgg
ccgcatgcgctgctgctgcacggtcaggccgggatcggcaagctgcagttcgcgcagcat
ctcgcgcagggtttcctgtgcgaatcgccgcagccgaacggcgagccgtgcggcgcctgc
gcggcctgcaactggttctcgcagggcaaccacccggactaccggatcgtgctgcccgag
gcgctggcgggcgaggcgccgggcgccgcggacgacgcgaagccggccgacgcggacgaa
ggcggcaagaagacccgggcgccgagcaaggaaatcaagatcgagcaggtgcgcgcgctg
ctcgacttctgcggggtcggctcgcaccgcggcggcgcgcgcgtcgtcgtgctgtatccg
gcggaagcgctcaacgtcgccgcgtcgaacgcgctgctgaaaacgctggaggagccgccg
cccggcgtcgtgttcctgctcgtgtcggcgcgcatcgaccgcctgttgccgaccatcatc
agccgctgccgccagtggccgatgaccgtgccggcaccggaggccgccgccgcgtggctg
gcggcgcagggcgtcgaccaggccagcgcgctgctcgcggaagccggcggcgcgccgctc
gccgcgctggcgctcgcgagcgacgagaatcgtccgctgcgcgactacacgttggggcaa
ctggccgccggggcggcctgcgacccgttcgcgtgcggcgagacgctgcagaagctgccg
gtgccgctggtgctcggctggctgcaacgctggctgtacgatgtgctcgcgcagcggatg
gccggcgcgccgcgctacttcccgatgcacgcggcggccctggcgcgctgcgcggaagcg
gtcgacgcgaacgcattcgcccgcttcatgaaagccgtgacgcggcagcggaccgtcgag
aaccatccgctcaacgcgcggctcgtattcgaggaattgtttctcggctatcgggaaatg
tttgcttga
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