Burkholderia cepacia DDS 7H-2: DM42_340
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Entry
DM42_340 CDS
T03302
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family protein
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bced
Burkholderia cepacia DDS 7H-2
Pathway
bced02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bced00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DM42_340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bced03021
]
DM42_340
Transcription machinery [BR:
bced03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DM42_340
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_23
HTH_24
HTH_IclR
HTH_28
HTH_11
HTH_7
HTH_3
GerE
TnsD
PhyR_sigma-like
Xre-like-HTH
HTH_29
HTH_31
MarR_2
LacI
HTH_38
HTH_Tnp_ISL3
HTH_20
Trp_repressor
HTH_Crp_2
HTH_40
MarR
HTH_17
HVO_A0261_N
Phage_NinH
Motif
Other DBs
NCBI-ProteinID:
AIO50185
LinkDB
All DBs
Position
1:complement(384847..385356)
Genome browser
AA seq
169 aa
AA seq
DB search
MSADKLSLHREIDALYADHHAWLRGWLSRKLGCAHRAADLAHDTFVRLLARDEPIGADEP
RAFLTTVAQRVLSNHWRREQIERAYLDVLAQRPEAVAPSPEERAVVVETLLEIDRLLDGL
PLAAKRAFLLAQLDGLTQAEIARELGVSLATVKRYLVKAGTQCFFTMAA
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctgacaagctgtccctccatcgagaaatcgacgccctctatgccgaccaccac
gcgtggttgcgcggctggctgagtcgcaagctcgggtgcgcgcaccgcgccgccgacctc
gcgcacgacacgttcgtacgcttgctcgcgcgcgacgagccgatcggcgccgacgagccg
cgcgcgttcctgacgaccgtcgcgcagcgggtgctgagcaaccactggcggcgcgagcag
atcgagcgcgcgtatctcgacgtgctcgcgcagcgcccggaagcagtggcgccgtcgccg
gaagagcgggccgtcgtcgtcgagacgctgctcgagatcgaccggctgctcgacggcctg
ccgctcgcggcgaagcgcgcgttcctgctcgcgcagctcgacgggctcacgcaggccgag
atcgcgcgcgaactcggcgtatcgctcgcgacggtgaagcgctatctcgtgaaggccggc
acgcagtgctttttcacgatggcggcctga
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