Burkholderia cepacia DDS 7H-2: DM42_350 Help Entry DM42_350          CDS       T03302                                  Name (GenBank) Rhs element Vgr family protein   KO K11904   type VI secretion system secreted protein VgrG Organism bced  Burkholderia cepacia DDS 7H-2 Pathway bced03070   Bacterial secretion system Brite KEGG Orthology (KO) [BR:bced00001]  09130 Environmental Information Processing   09131 Membrane transport    03070 Bacterial secretion system     DM42_350  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02044 Secretion system [BR:bced02044]     DM42_350 Secretion system [BR:bced02044]  Type VI secretion system   Imp/Vas secretion system core components    DM42_350 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Phage_GPD DUF2345 T6SS_Vgr Phage_base_V DUF6484 Zincin_1 4HPAD_g_N Motif Other DBs NCBI-ProteinID:  AIO48283 LinkDB All DBs Position 1:complement(397402..401136) Genome browser AA seq 1244 aa AA seqDB search MDLVAALTGYGQATRHIQIDTAMPDAFVVERFHGREGISESFRFEIDVLSSEPFLDLAPL IGSAVRLRLATAAGERCWNGYVTHAAYAESDGEFTRYRLTMESWLALLKLRRNCLYFVDL DAEGICERVFGDYPEAHWRYELVEPLRSFRLRGQYRETDLDFVSRQLSEAGLSFRIEHGQ DAGKAPSGDHTVVVFDRHARLPDGSAIAFNAQDVGDPDGVMTQFSDRRQLVPDRVVATSW KASELHALAGHAQQPADADAPLLPVREIYDGQRAGRFDTSGDAQRYAEQRLDALQLAKRV YRGGGSSRTLETGKVHTLNDYLGGTVRFVPLSIEHEAVNNLGAQIGQLFGRGELDKGLYR NRFVAVPEGTPIVPPFRDRPTVYGVQTAIVVGEPGGRVSSTRDHQVRIQFPWMRGVAPLP GGLTDTASRSNPTGHAPGDHRSGILVRVAEQAAGPNFGHAFVPRVGAEVVVGFESGNIDA PVVLGQVYGGRVRPPFSAGEGSDANHSGTLTGLQTQTLDGQPGSRWVMDDAAGQLRHELS NSTADTRLAQGYLIDQQGTMRGAYRGEGFELATQGWGVVRAGAGVLMSSTARRLGVSTQM DVAERVEQLKGAAKTAQELDTAATGAQAADLSANKAQTDFLKAIDPAQDGKYAGSVGGQS ATKPTGTQRDGGDPVERFATPVVLMESPENIVVTTPESAVSYAAQHVHLTSQGDAHVGAG ATVAAATGDAMSLYSVAGGLKAIAGEGPVSVEAHASTMEILADQTVRVTSTDERVDVLAQ DAIVLQQGPNRITLKGGDIVVETPGQFAVKAGGHPFPGPRATSVKLPALPVLPQGDPCDF LVQALAASPAGRGAVAGGGSLVGAASSIVGATASGAGGAALAAQTFESASSQPISTRTLP AQPAVSVGLGSAGSTLSREPQLGHSAPVPVSDELEGLPKSGPAASIAPCNLHVPPLKQLE YRPDMGLVDYYQTDANGRAVLEDQHPILLRFSGSTGMYDIEYTPATATLTATVRLRVVLV DQHEYTNGRLLVDRKTGKPVSIPYDGDGPGDDEVVWQKVERPASSADLAGFKRRIENGLN RNHYYMQPKKCPLGKNCTCKVKLKQEIEFVTTTGRFHSTISLYPMEARANSENWGEVQVT WDPVKKKATREATQNAIIHEAGHHYGWPDEYFENQGAVYGAYINAQKLVDVAMPQLQDNW QRTSSTNLMGEGMFLPNPEIPKYYMYGFRDWFQKKTNIEWEVLK NT seq 3735 nt NT seq  +upstreamnt  +downstreamnt atggatctagttgccgcattaacggggtacgggcaagcgacccgtcatatccagatcgat accgcgatgccggacgcattcgtcgtagagcgctttcacggtcgtgaagggatcagcgaa tcgttccggttcgagatcgacgtgctgtcgagcgagccgtttctcgatctcgcgccgctg atcggcagcgccgtgcggctgcgtctcgcgacggcggcgggcgaacgatgctggaacggc tacgtcacgcatgccgcttatgcggagagcgacggcgagttcacgcgctatcggctcacg atggagtcgtggctcgcgctgctgaagctgcgccgcaattgcctctatttcgtcgacctc gatgccgaggggatctgcgagcgtgtgttcggcgactatccggaagcgcactggcgctat gaactcgtcgagccgctgcgatcgtttcgcttgcgcggccagtatcgcgaaaccgatctc gatttcgtgtcgcggcagttgtccgaggccgggttgtcgtttcgcatcgagcacggacag gacgcggggaaggcgccgtcgggcgaccataccgtcgttgtgttcgaccgccatgcgcgg ctgcccgacggcagcgccatcgcattcaatgcgcaggacgtcggcgacccggacggcgtg atgacgcaattctccgatcggcgtcagctggtgccggatcgcgtggtggcgacgagctgg aaagccagcgaacttcatgcgcttgccggccatgcgcaacagcccgccgatgccgacgcg ccgttgctgccggtgcgggagatctacgacggccagcgcgcaggccgcttcgacacgagc ggcgatgcgcagcgttacgccgaacagcgtctcgacgcgctgcagctcgcgaaacgggtc taccgcggcggcgggtcgtcgcgcacgctcgagaccggcaaggtccatacgctgaacgac tatctgggcggcaccgtgcgattcgtaccgctgtcgatcgagcacgaggccgtcaacaac ctcggcgcgcagatcggccagctgttcggacgcggcgagctcgacaaggggctgtatcgc aaccgcttcgtcgcggtgccggagggcacgccgatcgtgccgccgttccgcgaccggccg acggtgtacggggtgcagactgcgatcgtcgtcggtgagccgggtgggcgcgtcagcagc acgcgcgatcaccaggtccgcatccagtttccgtggatgcgcggtgtcgcgccgctgccg ggcgggttgacggatacggcaagccggtccaatccgaccggccacgcgccgggcgatcac cgttcgggcattctggttcgcgtcgccgaacaggcggccgggccgaatttcggtcatgcg tttgtaccgcgcgtgggggcggaagtggtggtcggcttcgagtcgggcaacatcgatgcg ccggtcgtgctcggccaggtgtacggcgggcgtgtgcgtccgccgttctccgcgggcgaa ggcagcgacgcgaatcattcgggaacactgacgggcctgcagacgcaaaccctcgatggg caacccggcagtcgctgggtgatggacgatgcggccggacaactgcgtcacgagctgagc aattcgaccgccgacacgcgcctcgcgcagggctatctgatcgaccagcaggggacgatg cgcggcgcctatcgcggtgaaggcttcgaactggcgacgcagggatggggtgtcgtgcgg gccggcgcgggcgtgctgatgtcgagtaccgcgcgccggctcggcgtgtcgacgcagatg gatgtcgccgaacgcgtggagcaattgaagggcgcggcgaaaacggcgcaggaactcgac acggcggcgaccggtgcgcaggcggccgacctgagcgcgaacaaggcgcagactgatttc ctcaaggcgatcgatcctgcgcaggacggcaagtacgcgggcagcgtgggtggtcagagc gcgaccaagccgaccgggacgcagcgcgacggcggcgatcccgtcgagcgattcgcgacg cccgtggtgctgatggagtcgccggagaacatcgtggtgacgacgccggagagtgcggtg tcgtatgcggcgcagcacgttcatctgacgtcgcaaggcgatgcgcatgtgggcgccggt gccaccgtggccgcggcgacgggcgatgcgatgagcttgtacagcgtggcgggcgggctc aaggcaatcgcgggcgaagggccggtgagcgtcgaggcgcatgcgtcgacgatggagatt ctcgcggaccagaccgtgcgcgtgacgtcgaccgacgagcgcgtcgacgtgctcgcgcag gacgcgatcgtgctgcagcaggggccgaaccggatcacgttgaagggtggcgatatcgtc gtcgagacgccggggcaattcgcggtgaaggcgggcgggcatccgttcccggggccgcgg gcgacgagcgtgaagctgccggcgctgccggtgttgccgcaaggcgatccgtgcgacttt ctcgtgcaggcgctggcggcgagtccggcggggagaggggcggtggcggggggcggaagt ttggtgggtgcggcgagttcgatcgtcggtgcgacggcatcgggagcgggtggcgccgcg ctcgcggcgcagacgttcgagagtgcatcgagccagccgatctcgacccggacactcccc gctcagcccgcagtgtcagttggtcttggctcagcaggctccacgttgtcgcgggagccg caactcggacattcggctcccgtgccggtgtcggacgaactcgagggactaccgaagagc ggccccgccgcgtcgatcgccccatgcaatcttcatgtgccgccgctcaagcagcttgaa tatcggccggatatgggacttgtcgactactatcagactgacgcgaacggccgtgcagtg ctcgaagatcagcatccgattctgcttcgcttttccgggtcgaccggcatgtacgacatc gaatacacgccggcaacggccacgttgaccgcaacggttcgccttcgggtcgtgctcgtg gatcagcatgagtatacgaacggccggttgctggtggacaggaaaaccggtaagccggtt tcgataccgtacgacggcgatgggccgggggatgacgaggtcgtctggcagaaggtcgag cggcccgcgagttcggccgatctggcgggtttcaagcggcggatcgaaaacggcctgaac cgaaaccactactacatgcagccgaagaaatgcccactcggcaagaactgcacctgcaag gtgaagttgaagcaggagatcgaattcgtcacgacgaccggacggtttcacagcaccatc agtctgtacccgatggaggcgcgggcaaattcggagaactggggcgaggtgcaggtcacg tgggatcccgtgaagaagaaggcaacgcgtgaggctacgcaaaacgccattattcacgag gcaggacaccactatgggtggccggacgagtacttcgagaatcaaggggccgtctacggc gcctatatcaatgcacagaaactcgtcgacgtcgcgatgccgcagctccaggataattgg cagcgtacgtcttcgacgaatctgatgggcgaggggatgtttctgccgaatcccgagatt ccgaagtattacatgtacggatttcgcgattggttccagaagaaaaccaacatcgagtgg gaagtcctgaaatga

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