Burkholderia cepacia DDS 7H-2: DM42_3976
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Entry
DM42_3976 CDS
T03302
Name
(GenBank) coiled stalk of trimeric autotransporter adhesin family protein
KO
K21449
trimeric autotransporter adhesin
Organism
bced
Burkholderia cepacia DDS 7H-2
Brite
KEGG Orthology (KO) [BR:
bced00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bced02000
]
DM42_3976
Transporters [BR:
bced02000
]
Other transporters
Pores ion channels [TC:
1
]
DM42_3976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_stalk
YadA_head
YadA_anchor
ESPR
Motif
Other DBs
NCBI-ProteinID:
AIO44667
LinkDB
All DBs
Position
2:complement(549379..553569)
Genome browser
AA seq
1396 aa
AA seq
DB search
MNKIYKTIWNETIRAWIAVHEHAAVCGKPARSARRQVSRGLLALGVAATGFAVTGPDALA
QTVVSGGANNAPSGKTATVDQSCGQNFVDRKNPGNTSSGGGTYVLTNGCSTAVGNNASAQ
TAGVAVGDRASAAQGGVALGAGAAAVQGNSGVAIGPVALSSGNTSIAVGRQSAASGDYSM
ALGNVAYAKGESGIAMGHSALADGYRSIAIGASDSRAAGNDGVSNGANYNPATQTRASGA
NSVSLGAGAVTGVDDSIALGSNSVGAANAAGPAKFSGDAIASTGAVSVGSAGSERQIKNV
AGGTAATDAVNVNQLTAVSDRAVKYDTNADGSVNYNSVTLNPGGSPSKLANVAAGDVSST
STDAVNGAQLNQTNQTVNNLGDSTASAMGGGASYDPATGKVTSPTYNIAGGRQTTISDAI
NALNEGWNVTTSGNASGTSVAAIRPGATMTVDGGKNIALTQNGSTITVATSDTPTFTSVG
IDNGGPVLSGSGLNMAGQKITSVAPGDVSPTSTDAVNGAQLSDTNQKLRQASEQAVKYDT
NPDGSINYNSVTMNPGGTATKVTNVAAGDVSANSTDAVNGSQLYDTNQNVTRLGDTLNHI
AGDTSQSYTDRNGTGIRYARTNEAGLAQTDAFAQAPGSTAVGYSATASADNALALGREAT
ASHAGSVALGANSIADGSTLGNAAYNPGTGPLAGTNPVGEVSIGSGGAERRITNVAAGSV
DTDAVNVSQLKSVETSVGNVSDRAVKYDGSPGDPKTQITLDGPASTDGGKTGGTKITNVA
QGDVSANSTDAVNGSQLNETNGNVTKLGDTLNHIAGDTSQSYTDQNGTGIRYVRTNEAGL
AQTDAFAQAPGSTAVGYAATASADDALALGRQATASHGGSVALGANAIADGATLGNAAYN
PGTGTLAGTNPVGELSIGSSGAARRITNVAAGAGDTDAVNVSQLKSLQASVVDWSAGAVK
YDRNPDGTIDYTHVTMNPGGAPAAITNVAAGELSATSTDAVNGSQLYETNRNVTRLGDQV
DTIANGGGIKYFHANGGTAPLPDSQANGVGSAAMGPAATASGVDSVAVGNGAVAGKDGDV
ALGAGSVADRGAEQYAGKYSGAQNSTAGTVSVGAPGAERTVSNVADGREATDAVNVRQLD
GAVKEAKDYTDQQVQKVAGDVVNVGDDVRKLGDRMTNVEGDVTRVKNGAGGMFQVSQDQT
PVAPAVSGSNTVAGGAGAVASGANSTALGNQASATGSNSSAIGNGAKASGSNSVALGAGS
DGSRDNAVSMGATGRERQIVNVAPGTAGTDAVNVNQLRAMEHGLGSQIAGVRSDMQSLDH
RLTAGVAAAMAMASLPQAYLPGKSMVALGGGAWRGESGVALGLSTVSDNGNWVLKGSASS
TSRGDLGASVGVGYQW
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagatatacaaaacaatctggaatgaaacgatccgcgcttggatcgcggttcac
gagcatgccgccgtgtgcggcaagccggcgcgcagcgcacgtcgccaggtgtcgcgcggg
ttgctggcgctgggcgtggccgcgaccggtttcgccgtgacggggcccgatgcattggca
cagacggtcgtatcgggcggcgccaacaatgcgccgtcgggcaaaacggcaacggtcgac
cagagttgcggccagaatttcgtcgaccggaaaaatccgggtaacacgtcgtcgggtggc
ggcacctacgtgttgaccaacggctgttcgacggcggtcggcaacaatgcgtccgcgcag
acggcgggcgtcgcggtcggcgatcgcgcgagcgccgcgcagggtggcgtggcgttgggc
gccggcgccgcagcggtgcagggcaattcgggcgtggcgatcggcccggttgcgctgtcg
agcggtaacacgagtatcgcggtcggccggcaatccgcggcaagcggcgattattcgatg
gcgctcggcaacgtcgcgtatgcgaagggcgagagcggcattgcgatggggcactcggcg
ctggcggacggctatcggtcgatcgcgattggcgcatccgattcgcgggcggccggcaac
gacggtgtgtcgaacggcgcgaactacaacccggccacgcaaacgcgtgcgagcggggcg
aactcggtgtcgctcggggcgggcgccgtgaccggcgtcgacgacagcatcgcgctcggc
tcgaacagcgtcggcgcggcgaatgcggcgggccccgcgaagttcagtggcgacgcgatt
gcgtcgaccggtgcggtgtcggtcggcagcgcgggcagcgaacgccagatcaagaacgtc
gccggcgggacggccgcgaccgatgcggtgaacgtgaaccagttgaccgcggtgtcggac
cgtgcggtcaaatacgacacgaacgcggacgggtcggtcaactacaacagcgtgacgctg
aacccgggcggttcgccgtcgaagctggccaatgtcgcggctggcgacgtgtcgtcgacg
agcaccgatgcagtcaacggcgcgcagctgaaccagacgaaccagaccgtcaacaacctc
ggcgacagcacggcgtcggcgatgggcggcggtgcgtcgtacgaccccgcgacgggcaag
gtgacgagcccgacgtacaacatcgcgggcggccggcagacgacgatcagcgacgcgatc
aacgcgctgaacgaaggctggaacgtgacgacgagcggcaatgcgagcggtacgtcggtg
gcggcgatccggccgggcgcgacgatgacggtcgacgggggcaagaacatcgcgctgacg
cagaacggttcgacgatcacggtcgcgacgagcgacacgccgacgttcacgagcgtgggg
atcgacaacggcggcccggtgctgtcggggtcggggctgaacatggccggccagaagatc
acgagcgtcgcacccggcgacgtgtcgccgaccagcaccgacgcggtgaacggcgcgcag
ctgagcgacacgaaccagaagcttcggcaggcgagtgagcaggcggtgaagtacgacacg
aaccccgacggctcgatcaactacaacagcgtgacgatgaacccgggaggcacggcaacg
aaggtcacgaacgtggcggcgggcgacgtgtcggcgaacagcaccgatgcggtgaatggt
tcgcagctctacgacacgaaccagaacgtaacgaggctaggcgatacgctgaaccatatc
gccggcgatacgagccagtcatacacggaccggaacgggacaggcattcgttacgcgagg
acgaacgaagcgggtctcgcgcagaccgatgcgttcgcacaggcgccgggcagcacggcc
gtcggctactcggcgaccgcaagcgcggataacgcgctggcgctgggtcgcgaggcgacg
gcctcgcatgcaggcagcgtcgcgctcggcgccaattcgatcgcggatggcagcacgctc
ggaaacgcggcatacaacccgggcacgggcccgcttgcggggacgaacccggttggcgag
gtgagcatcggcagcggtggcgcggaacgccggatcacgaacgtggccgcgggctcggtc
gataccgacgccgtgaacgtgagccagttgaagtcggtggaaacgagcgtcggcaacgtg
agcgaccgcgcggtgaagtacgacggcagcccgggcgatccgaagacgcagatcacgctc
gacggcccggcctcgacggacggcggcaagaccggtggcacgaagatcacgaacgtggcg
caaggtgacgtgtctgcgaacagtaccgacgccgtgaacggctcgcagctcaacgaaacg
aatggaaacgtgacgaagctgggcgacacgctgaaccacatcgccggtgatacgagccag
tcttacaccgaccagaacgggacgggtatccgctatgtacgtacgaacgaagcgggcctt
gcgcagactgacgcgtttgcgcaagcccctggcagcacggccgtcggttatgcggcaacc
gccagcgccgacgacgcgctggcgctgggccgtcaggcgacggcgagccatggtggcagt
gttgcgctgggcgccaatgcgatcgcggacggcgcgacactcggcaatgccgcgtacaac
ccgggcacgggtacgctggccggcacgaatccggtcggcgaactgagcatcggcagcagc
ggtgcggcgcgccggatcacgaacgtcgcggccggcgccggcgataccgatgccgtcaac
gtcagccagttgaagtcgctgcaggcgagcgtcgtcgactggagcgcgggcgcggtgaag
tacgaccgcaacccggacggcacgatcgactacacgcacgtgacgatgaacccgggcggc
gcgccggcggcaatcacgaacgtcgcggccggcgaactgtcggcgaccagtacggatgcg
gtcaacggttcgcaactgtacgagacgaaccggaacgtgacgcggctcggcgaccaggtc
gacaccatcgcgaacggcggcggcatcaagtacttccacgcgaacggcggcacggcgccg
ctgcccgactcgcaggcgaacggcgtgggcagcgcggcgatggggccggcggcgaccgcc
agcggcgtcgattcggtcgcggtcggtaacggcgcggtcgcaggcaaggacggcgatgtc
gcactgggcgcgggctccgtcgccgatcgcggcgcggagcagtacgccggcaaatactcc
ggggcgcagaacagcacggccggcacggtgtcggtcggcgcaccgggtgccgagcgtacg
gtcagcaacgtggccgacggccgcgaagcgaccgacgcggtgaacgtgcgccagctcgac
ggtgccgtcaaggaagcaaaggactacaccgatcagcaggtgcagaaggtggccggcgat
gtcgtgaacgtcggcgacgacgtacggaagctcggcgaccggatgacgaatgtcgaaggc
gacgtgacccgcgtgaagaacggcgcgggcggcatgttccaggtcagccaggaccaaacg
ccggtcgcacctgccgtaagtggcagcaacacggtagccggcggcgcgggtgccgtcgcg
tcgggtgcgaacagcacggcgctcggcaaccaggcgagcgcgacgggcagcaattcttcg
gcgatcggtaacggtgcgaaggcgtcgggcagcaattcggtcgcgctgggtgcgggttcc
gacggcagccgcgacaacgcggtgtcgatgggcgcgaccggtcgcgaacgccagatcgtc
aacgtggcgcccggcacggccggcaccgatgcggtcaacgtcaaccagttgcgcgcgatg
gaacatggcctcgggagccagatcgcgggcgtgcgcagcgacatgcagagtctggatcac
cggttgaccgcgggcgttgccgcggcgatggcgatggccagcttgccgcaggcgtatctg
cctggcaagagcatggtcgcgctcggcggtggtgcgtggcgcggcgaaagcggtgtcgcg
ctcggcctgtcgaccgtgtccgacaacggcaactgggtgctgaagggctccgcgagcagt
acatcgcgtggtgacctcggcgcatcggtcggcgtcggttaccagtggtga
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