Burkholderia cepacia DDS 7H-2: DM42_3981
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Entry
DM42_3981 CDS
T03302
Name
(GenBank) hypothetical protein
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
bced
Burkholderia cepacia DDS 7H-2
Pathway
bced00330
Arginine and proline metabolism
bced00480
Glutathione metabolism
bced01100
Metabolic pathways
bced01110
Biosynthesis of secondary metabolites
bced04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
bced00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
DM42_3981
09106 Metabolism of other amino acids
00480 Glutathione metabolism
DM42_3981
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
DM42_3981
Enzymes [BR:
bced01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
DM42_3981
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
HSD_C
Motif
Other DBs
NCBI-ProteinID:
AIO45772
LinkDB
All DBs
Position
2:559268..561439
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AA seq
723 aa
AA seq
DB search
MKIAVEPALIGAFLTTHEQVDVFQTDFTNIAAIVVGIDSAEKVLKTVERTGFAIPFFVAV
EPDQEVPPSVLPSASGVIQLRHGGRHYYGRQISAAADIYSENLLPPFFKVMREYVQRGYV
EFDCPGHQGGQFFSNHPLGRMFFDFFGETLFRADLCNADVRLGDLLIHEGPALEAQRNAA
RIYNADKTYFVLNGTSTSNKVVTSALLAPDDLVLFDRNNHKSVHLGALVLSGARPVYLET
ARNAWGLIGGVDSAALGEARIRDAIRDVAPERADLPRPFRLAVIQLGTYDGTIYNAREIV
DRVGHLCDYILFDSAWVGYEQFIPMMQDCSPLMLTLGPDDPGIFVTQSVHKQQAGFSQTS
QIHKKDSHIEGQKRFCDHRRFNNAYMIHASTSPFYPMFAALDVNAQMHAGPAGKRLWRDC
VAHGVDARKLLLKTCRQIRPFVPQQVDGRPWADHPTEQIVDDLRFFRFHPADTWHGFDGY
ADDQYFVDPCKLLLTTPGIDRDTHEYAAFGAPAPILARYLREHGVVPEKADLYTILFLLT
PSESFGKLQHLVAHLAQFERHLDQDTPLREAIPSLCEAYPELYGTMRLRQLCQRMHDFYR
SHDMKHLQKQMFRRAQFPKQAMLPQAANAELIRNNVELVTLDRIEGRIATEGALPYPPGI
FCVVPGEVWGGPALDYFRALEAGINALPGFEPEIQGVYLQTKPDGTKQASAYVVAAGADA
SRM
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaatcgcagtcgagccggcgctgatcggcgcattcctcaccacgcacgaacaggtc
gacgtattccagaccgatttcacgaatatcgcggcaatcgtcgtcggaatcgattccgcg
gaaaaggtactgaaaaccgtcgaaagaaccggtttcgcgattccgttcttcgtcgcggtc
gagcccgaccaggaagtgccgccgtcggtcctgccgagcgcgagcggcgtgatccagctt
cggcacggcggccgccattactacggccggcagatttccgccgccgccgacatctacagc
gagaacctgctgccgccgttcttcaaggtcatgcgcgaatacgtgcagcgcggctacgtc
gaattcgactgcccgggtcaccagggcggccagttcttctcgaatcatccgctcggccgg
atgttcttcgatttcttcggcgaaacgctgtttcgcgcggacctctgcaacgcggacgtg
cggctcggcgacctgctgatccacgaagggcccgcgctggaagcgcagcgcaacgccgcg
cgcatctacaacgcggacaagacatacttcgtgctgaacggcacgtcgacgtcgaacaag
gtcgtcacgagcgcgctgctcgcgcccgacgatctcgtgctgttcgatcgcaacaaccac
aagtcggtgcacctcggcgcgctcgtgctgtccggcgcgcggccggtctacctcgagacc
gcgcgcaacgcgtggggcctcatcggcggcgtcgacagcgcggcgctcggcgaggcgcgc
attcgcgacgcgatccgcgacgtcgcgcccgagcgcgccgacctgccgcgcccgttccgg
ctcgcggtgatccagctcggcacctacgacggcacgatctacaacgcgcgcgaaatcgtc
gaccgggtcggccatctgtgcgactacatcctgttcgattcggcgtgggtcggctacgaa
cagttcatcccgatgatgcaggactgctcgccgctgatgctgacgctcggccccgacgat
cccggcatcttcgtcacgcaatcggtgcacaagcagcaggccggcttctcgcagacgtcg
cagatccacaagaaggacagccacatcgagggccagaagcgcttctgcgatcaccggcgc
ttcaacaacgcgtacatgatccacgcgtcgacgagcccgttctacccgatgttcgcggcg
ctcgacgtcaacgcgcagatgcacgcgggcccggccggcaagcgcctgtggcgcgactgc
gtcgcgcacggcgtcgacgcgcgcaagctgctgctgaaaacctgccgccagatccgcccg
ttcgtcccgcagcaggtcgacggccgcccgtgggccgaccatccgaccgagcagatcgtc
gacgacctgcgcttcttccgcttccatccggccgacacgtggcacggcttcgatggctat
gcggacgaccagtatttcgtcgatccgtgcaagctgctgctgacgacgcccggcatcgat
cgcgacacgcacgaatacgcggcgttcggcgcgccggcgccgattctcgcgcgctacctg
cgcgagcacggcgtcgtgcccgagaaggccgacctgtacacgatcctgttcctgctcacg
ccatcggagagtttcggcaagctgcagcatctggtcgcgcacctcgcgcagttcgagcgc
catctcgaccaggacacgccgctgcgcgaagcgattccgtcgctgtgcgaagcgtatccg
gagctgtacggcacgatgcgcctgcggcagctgtgccagcgcatgcacgacttctaccgc
agccacgacatgaagcatctgcagaaacagatgttccggcgcgcgcagttcccgaagcag
gcgatgctgccgcaggccgcgaatgccgagctgatccgcaacaacgtcgaactcgtgacg
ctcgaccgcatcgaaggccggatcgcgaccgaaggcgcgctgccctacccgccgggcatc
ttctgcgtggtgccgggcgaagtgtggggcggcccggcgctcgactacttccgcgcgctc
gaagccggaatcaacgcactgccgggcttcgagccggaaatccagggcgtgtacctgcag
acgaagccggacggcaccaagcaggcatcggcgtacgtggtcgcggccggcgcggacgcg
tcgcgcatgtag
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