KEGG   Burkholderia cepacia DDS 7H-2: DM42_4418
Entry
DM42_4418         CDS       T03302                                 
Name
(GenBank) ABC transporter family protein
  KO
K02052  putative spermidine/putrescine transport system ATP-binding protein
Organism
bced  Burkholderia cepacia DDS 7H-2
Pathway
bced02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:bced00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    DM42_4418
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:bced02000]
    DM42_4418
Transporters [BR:bced02000]
 ABC transporters, prokaryotic type
  Mineral and organic ion transporters
   Putative spermidine/putrescine transporter
    DM42_4418
SSDB
Motif
Pfam: ABC_tran TOBE_2 AAA_21 AAA_22 SMC_N ABC_ATPase AAA_25 AAA Rad17 Ribosomal_S17 AAA_19 nSTAND3 AAA_16 nSTAND1 AAA_30 NB-ARC ORC-CDC6-like
Other DBs
NCBI-ProteinID: AIO45325
LinkDB
Position
2:1020384..1021466
AA seq 360 aa
MSFLTLTDLTKTFGALTAVADVNLSVEQGEFVSLLGPSGCGKTTTLQMIAGFVDVTRGRI
ALDGQDITHLKPNRRGLGIVFQSYALFPHMSVAENVGFGLDMRGVDKAERAERIRAALAL
VRLDALAHRFPRELSGGQRQRVAIARAVVIEPPVLLLDEPMSNLDAKLREEMQFELRAIQ
RKIGTTTIMVTHDQSEALSISDRVVVMEAGRITQTDTPYRAYERPENRFVSQFIGKANLL
PGTIVAHDGDAIRIDLGHDLAETGRTAHLPPRERDMRVGDAVSVCIRPEKLRLCAPDAGR
FAATVTSRFFLGSQWLYRVDSALGEVLVCCQNEGAEPLAEGAPVGIDWHSDAVRVMRREA
NT seq 1083 nt   +upstreamnt  +downstreamnt
atgtcgtttctcacgcttacggatctgacgaaaaccttcggcgcgctcaccgccgtcgcg
gacgtcaacctgtcggtcgaacagggcgaattcgtgtcgctgctcgggccgtccggttgc
ggcaagaccaccacgctgcagatgatcgccggcttcgtcgacgtcacgcgcggccgcatc
gcgctcgacgggcaggacatcacgcacctgaagccgaaccgccgcgggctcggcatcgtg
ttccagagctatgcgctgtttccgcacatgagcgtcgctgagaacgtcggcttcggcctc
gacatgcgcggcgtcgacaaggccgagcgcgcggagcgcatccgcgcggcgctggcgctc
gtacggctcgacgcgctcgcgcaccgctttccgcgcgaattgtcgggcggccagcggcag
cgggttgcgatcgcgcgcgcggtcgtgatcgagccgcccgtgctgctgctcgacgaaccg
atgtcgaacctcgacgcgaagctgcgcgaggagatgcagttcgagctgcgcgcgatccag
cgcaagatcggcacgacgacgatcatggtcacgcacgatcagtccgaagcgctgtcgatc
agcgaccgcgtggtcgtgatggaagccggccgcatcacgcagaccgatacgccgtaccgc
gcgtacgagcgcccggaaaaccgcttcgtgtcgcagttcatcggcaaggcgaacctgttg
cccggcacgatcgtcgcgcacgacggcgacgcgatccgcatcgacctcgggcacgatctc
gccgagacgggccgcaccgcgcacctgccgccgcgcgagcgcgacatgcgcgtcggcgac
gcggtgtcggtctgcatccgtccggagaagctgcggctgtgcgcgcccgacgccggccgc
ttcgccgcgaccgtcacgagccggttcttcctcggcagccagtggctgtaccgcgtcgac
agcgcgctcggcgaagtgctcgtgtgctgccagaacgaaggcgcggaaccgctcgcggaa
ggcgcgccggtcggcatcgactggcacagcgacgcggtgcgcgtgatgcgccgggaggcc
tga

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