Burkholderia cepacia DDS 7H-2: DM42_4667
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Entry
DM42_4667 CDS
T03302
Name
(GenBank) hypothetical protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
bced
Burkholderia cepacia DDS 7H-2
Pathway
bced03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bced00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DM42_4667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bced03000
]
DM42_4667
03400 DNA repair and recombination proteins [BR:
bced03400
]
DM42_4667
Enzymes [BR:
bced01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
DM42_4667
Transcription factors [BR:
bced03000
]
Prokaryotic type
Helix-turn-helix
AraC family
DM42_4667
DNA repair and recombination proteins [BR:
bced03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DM42_4667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AIO45187
LinkDB
All DBs
Position
2:1284775..1286226
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AA seq
483 aa
AA seq
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MRLDPDTCYDALLSRNRRFDGWFFVGVATTGVYCRPVCPVKPPKAQNCSYYPTAAAAEKA
GFRPCMRCRPELAPGHGLLDLSGNLADAAATLIDDGFLNAHSVAALARRVGVTERHLRRI
FGAQFGVSPVEFAQTQRLLMAKRLLTDTALPVAVVASTAGFGSVRRFNDLFRQRYGLNPL
RLRKGAGASADGDMTFPLPYRPPFAWADLMRFLAQRQIDGVERIDARGYARIVELPNRND
GGRAAGWLSVAHVPQRFALAVTVSPALTPVVPAVLARVRRLFDLDSRPDVIDAHLGDLAN
GSPGLRVPGAFDGLEMAIRAIAGEQLAAAQADTPLLARIAARFGNPVDGAPPGLAHALPG
AATLAALPPSVLETIGIERDTAHAIVSLARAVDDGTLALEPMAPLDATLAALRALPGFDE
RAVQYVAMRAMAWPNAFPADDAWLPGRTERTRVSSSAPHAARWAPWRAYAALHVWRLHGE
RLR
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcgatcccgacacctgctacgacgccctgctttcgcggaaccgccgcttcgac
ggctggttcttcgtcggcgtcgcgacgaccggcgtgtactgccgcccggtctgcccggtg
aagccgccgaaagcgcaaaactgcagctactacccgaccgccgcggccgccgagaaagcc
ggcttccggccctgcatgcgctgccgccccgagctcgcgcccggccacgggctgctcgac
ctgtccggcaatctcgccgacgcggccgcgacgctgatcgacgacggtttcctgaacgcg
cattccgtcgcggcgctcgcacggcgcgtcggcgtgaccgaacgccatctgcggcggatc
ttcggcgcgcagttcggcgtgtcgccggtcgagttcgcgcagacgcagcgactgctgatg
gccaagcggctgctgaccgataccgcgctgccggtggccgtcgtcgcgtcgacggccggg
ttcggcagcgtacggcgcttcaacgacctgttccgccagcgctacggcctcaatccgctg
cggctgcgcaaaggagccggcgcgtcggccgacggcgacatgactttcccgctgccgtac
cggccgccgttcgcgtgggccgacctgatgcgctttctcgcacagcggcagatcgacggc
gtcgagcggatcgacgcgcgcggttatgcacgcatcgtcgaactgccgaaccggaacgac
ggcggacgcgcggccggctggctgtccgtcgcgcacgtgccgcagcgcttcgcgctcgcc
gtcaccgtgtcgcccgcgctgacgccggtcgtgccggccgtgctcgcgcgcgtgcgccgg
ctgttcgatctcgacagccgccccgacgtgatcgatgcgcatctcggcgatctcgcgaac
ggttcgccgggcctgcgcgtgcccggcgcgttcgatggcctcgagatggcgatccgtgcc
atcgcgggcgagcagcttgcggcggcgcaggccgatacgccgctgctcgcacggatcgcg
gcacgcttcggcaatccggtcgatggcgcgccgccgggcctcgcgcatgcgctgcccggc
gccgcgacgctggcggcgctaccgccttcggtcctcgaaacgatcggcatcgagcgcgac
acggcgcacgcgatcgtgtcgctcgcccgcgcggtcgacgacggcacgctcgcgctcgaa
ccgatggcgccgctcgacgcaacgctcgccgcgctgcgcgcgctgcccggcttcgacgaa
cgcgcggtgcagtacgtcgcgatgcgcgcgatggcgtggccgaatgcgttccccgccgac
gacgcgtggctgcccggccgcaccgagcgcacgcgcgtatcatcatcggcgccgcatgcg
gcacgctgggcgccgtggcgcgcgtatgccgcgctgcacgtgtggcgccttcatggagag
aggttgcgatga
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