Burkholderia cepacia DDS 7H-2: DM42_4741
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Entry
DM42_4741 CDS
T03302
Symbol
choX
Name
(GenBank) choline ABC transporter, periplasmic binding family protein
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
bced
Burkholderia cepacia DDS 7H-2
Pathway
bced02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
bced00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DM42_4741 (choX)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bced02000
]
DM42_4741 (choX)
Transporters [BR:
bced02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
DM42_4741 (choX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
Motif
Other DBs
NCBI-ProteinID:
AIO44310
LinkDB
All DBs
Position
2:1358842..1359786
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AA seq
314 aa
AA seq
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MMKKAWMLAATLLTALATAPAHASEGDVCRKVTLGDVGWSDIAATTGVAMMLLDGLGYEA
TKTIASPPIVLAGVKKAQIDAFLGYWDPSMTPTVKPFVDAGAVHLLPQPNLVGARYTLAV
PQYASDKGLKRFADIARFRDQLDGKIYGIGAGNNGNALIQRMIDKNEFGLGGFKLVESSE
AGMLVQVTRAVQEHRMIVFLAWEPHPMNLQYKIAYLDGGDTVFGPNYGSAKVYTLVSPGY
LERCPNVGRLLTNLTFTTDEENQLMAPIMNHADPIAVAKEWAKKNPGVLSKWLDGVTTID
GKNAKDAIDKLIGA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaaggcatggatgctggctgcaacgttgctgacggcgctggcaacggccccc
gctcacgcgtcggaaggcgacgtgtgcaggaaggtgacgctcggcgacgtcggctggagc
gacatcgcggccaccaccggcgtcgcgatgatgctgctggacgggctcggctacgaggcc
accaagacgatcgcgtcgccgccgatcgtgctggccggcgtgaagaaggcgcagatcgat
gccttcctcggctactgggatccgagcatgacgccgacggtgaagccgttcgtcgacgcc
ggcgccgttcacctgctgccgcagccgaacctggtcggcgcgcgctacacgctggccgtg
ccgcaatacgcgtcggacaagggcctcaagcgttttgccgacatcgcccggtttcgcgac
cagctcgacggcaagatctacgggatcggcgcgggcaacaacggcaacgcgctgatccag
cgaatgatcgacaagaacgagttcgggctgggcggcttcaagctggtcgaatcgagcgaa
gccgggatgctcgtgcaggtgacgcgcgcggtgcaggagcaccggatgatcgtgttcctc
gcgtgggagccgcatccgatgaacctccaatacaagatcgcgtatctcgacggcggcgac
accgtgttcggcccgaactacggctccgcgaaggtctatacgctggtctcgcccggctat
ctcgaacgctgcccgaacgtcggccggctgctgaccaacctgacattcacgaccgacgag
gagaaccagctgatggcgccgatcatgaatcacgccgacccgatcgcggtcgcgaaggaa
tgggcgaagaagaaccccggcgtgctgtcgaagtggctcgacggcgtcacgaccatcgac
ggaaagaacgcgaaggacgcgatcgacaaactcatcggcgcgtga
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