Burkholderia cepacia DDS 7H-2: DM42_4942
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Entry
DM42_4942 CDS
T03302
Name
(GenBank) bacterial regulatory s, luxR family protein
KO
K19731
LuxR family transcriptional regulator, quorum-sensing system regulator CciR
Organism
bced
Burkholderia cepacia DDS 7H-2
Pathway
bced02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bced00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DM42_4942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bced03000
]
DM42_4942
Transcription factors [BR:
bced03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
DM42_4942
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
HTH_23
GAF_2
HTH_30
HTH_38
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AIO44742
LinkDB
All DBs
Position
2:1564305..1565348
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AA seq
347 aa
AA seq
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MASCHAAADRRDIRECAGRCIKTLHFYGCDTAASDYTCFLHGDQLVNSRTCATCNRHALC
CFNPKRRTSGHRAAHQCAKFLRGPPVDRVCQRGAGDTPTVPQPLTSSLAGRWAPLATAFL
NTVDLSSLLKLFGDVSASLGFPRFAISRVSRRHTGNGRAMAVETLCARYPDHWVAHYAQR
DYGPVDPVHRMAFARATPYRWADIRGLNRIEQRVLGEARDAGLTSGVSIPLRETNGDILL
VNLASPSPEIKTEVHMRLASSIGALFHQELHRLMKPHRPEPTLELSPRQQECLAWVARGK
SSWAIASIVGISPHTVDYHIAEAMKILGINSRTAAAVHAVTTGLIHV
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatgccatgcagccgcggaccgacgtgatatacgcgagtgcgcgggtcgatgt
atcaaaacattacatttttatggctgtgatacggctgcaagcgactacacttgctttttg
catggcgatcaattggtcaatagcagaacatgcgccacctgcaatcgccacgcattgtgc
tgcttcaatcccaaacgacgcacgtccggccaccgcgccgcgcaccagtgcgcgaagttc
ctccgagggcctccagtggatcgagtctgtcaacgcggcgcgggtgacacacccaccgta
ccgcagcctttaacatcaagcctggccggccgatgggcaccgctggccaccgcctttctc
aataccgtggacctgtcgtctttgctgaagttgttcggtgacgtgtccgcttcgttgggc
ttcccacgctttgccatcagccgagtctctcgaagacacacgggaaacggccgcgcgatg
gcagtcgagacgctttgcgcacgctatccggatcattgggtcgcccattacgcgcaacga
gactacggtccggtcgatccggtccatcggatggcgtttgcccgtgccaccccctatcga
tgggccgacatcagaggcttgaatcgcatcgagcagcgcgtgctcggtgaggcacgcgac
gcgggattaaccagtggcgtgagtatcccgcttcgcgagaccaacggcgacatcctgctg
gtgaatctcgccagtccgtcgccggagatcaagacagaagtccacatgcggctcgcgagc
tcaattggcgcgctctttcatcaagagctccatcgattgatgaagccccatcggcctgag
ccgacgcttgaactctccccgcgccaacaagagtgccttgcgtgggttgcccggggtaaa
tcgtcatgggcgatcgcctccattgtcggcatatcgccccataccgttgactaccacatc
gccgaagcgatgaagattttagggatcaacagtcgaaccgcggcagctgtgcatgccgtc
acaaccggcttgatccacgtgtaa
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