Burkholderia cepacia DDS 7H-2: DM42_505
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Entry
DM42_505 CDS
T03302
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bced
Burkholderia cepacia DDS 7H-2
Pathway
bced03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bced00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DM42_505 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bced03400
]
DM42_505 (recD)
Enzymes [BR:
bced01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DM42_505 (recD)
DNA repair and recombination proteins [BR:
bced03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DM42_505 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
SH3_13
Helicase_RecD
SLFN-g3_helicase
DEAD
AAA_22
RecD_N
AAA_25
MukB
ATPase
CbiA
Motif
Other DBs
NCBI-ProteinID:
AIO49086
LinkDB
All DBs
Position
1:complement(574530..576839)
Genome browser
AA seq
769 aa
AA seq
DB search
MTASDDMLEFTGGLVARLPEPADFGIALAEGFARRIGDLARRAGAPSASARWAARAAFAT
SRATAGGHVCVALAALAQRYEAPLDEVRAALAASGVVAFGTLARGDERPLIVDRHDHLYL
SRYFDYERRLADALVAQAGVAAPDEGLSPDRLRDSLARYFGPATGEVDWQRVAAIVALTG
RVTIVSGGPGTGKTTTVVGVLACLLDAHPGLRIALAAPTGKAAQRMQEALHARAGDLPPE
LAARLPDTSYTLHRLLGGGGAAGFRHHRDNPLPYDLIVVDEASMIDVALAAHLLDALAPG
ARLVLLGDKDQLAAVEAGAVFAELSARPAFTATARTRIAQALGVDEAAFVAALPVPDEAA
PAAVPVANPVPAAARAPAPPSASVPVSRRSASRSKVDTRQASLFDDEPQDDEVSSTDIAP
PPPTESAPLLDASASDDTPAWIEADELAWLDAVELPPFDAGDAALASVTAASPSAGEAAA
AAASAIAPAAAPLADCVVWLERNYRFGLDSPIGRLSLAIRRGDVQAALDALPADDSAAAS
FHDDAGDTLASSTVERLARRFGAYLDALRDALAAPVPDPLPLFDALNRFRILCATRSGSR
GAEHVNALVAAHVRHAARVPLAVGAHWFTGRPIMVTRNDYALGLFNGDIGIALPDAHGVL
RVWFRRADGTARAVSPAALPPHETAFALTVHKSQGSEFDEAALVLPASFGRVLTRELVYT
AVTRARTRVQVIGPRRVLAQAVATRTQRDSGLAARVDEALARRRTEASR
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcatccgacgacatgctcgaatttaccggcggcctcgtcgcgcggttgcccgag
ccggccgatttcggcatcgcgctcgcggaaggcttcgcgcgccgcatcggcgatctcgcg
cggcgtgccggtgcgccgtccgcatcggcacgctgggcggcgcgcgccgcgttcgcgacg
agccgcgcgaccgccggtggccacgtgtgcgtcgcgcttgctgcgctcgcgcagcgttac
gaagcaccgctcgacgaggtccgcgcggcgcttgccgcgagcggcgtggtcgcgttcggc
acgctggcacgcggcgacgaacggccgctgatcgtcgaccggcacgatcatctgtacctg
tcgcgctatttcgactacgaacggcggctcgccgatgcgctcgtcgcgcaggcgggcgtc
gccgcgccggacgaaggcctgtcgcccgaccggttgcgcgacagtctcgcccgttacttc
gggccggctaccggcgaagtcgactggcagcgcgtcgcggcgatcgtcgcgctgaccggc
cgcgtgacgatcgtcagcggcgggccgggcacgggcaagacgacgaccgtcgtcggcgtg
ctcgcctgtctgctcgacgcgcatccggggctgcgcatcgcgctggccgcaccgaccggc
aaggccgcgcagcggatgcaggaggcgctgcacgcgcgtgccggcgatctgccgcccgag
ctcgcggcgcgcctgcccgacacgtcgtacacgctgcatcggttgctgggcggcggcggg
gcggccggcttccggcatcatcgcgacaatccgttgccgtacgacctgatcgtcgtcgac
gaggcgtcgatgatcgacgtcgcgctcgccgcgcatctgctcgacgcgctcgcgccgggt
gcgcggctcgtattgctgggcgacaaggatcaactggccgcggtcgaggccggcgccgta
ttcgcggagctgagcgcgcggccggcgttcaccgccacggcgcgcacgcgcatcgcgcag
gcgctgggcgtcgacgaggcggcgttcgtcgccgcgttgccggtgccggacgaagcggcg
ccggcagcggttcccgttgcgaatccggtgcccgctgccgcacgggcaccggcgccgcca
tcggcatccgttcctgtttcgcgcagatcggcgtctcggtcgaaagtcgatacgcggcag
gcatcgctgttcgacgacgaaccgcaggacgatgaagtgtcgtcgaccgacatcgcgccg
ccgccacccaccgagtcggcaccgctcctcgatgccagcgcatcggacgatacgcccgcc
tggatcgaggccgacgaactcgcgtggctcgacgccgtcgagctgccgccgttcgatgcg
ggcgacgcggcgctcgcatcggtgactgctgcatcgccgtcggcaggcgaagccgccgcg
gctgccgcgtccgccatcgcgcccgctgcggcgccgctcgccgactgcgtcgtgtggctc
gaacgcaattaccgcttcgggctcgattcgccgatcggacggctgtcgctcgcgatccgc
cgcggcgacgtgcaggcggcgctcgatgcgctgcccgccgacgattcggcggccgcatcg
tttcacgacgatgcgggcgacacgctggcgtcgtcgacggtcgagcggctcgcccggcgc
ttcggcgcatacctcgacgcattgcgcgacgcgctggccgcaccggtgcccgatccgttg
ccgctgttcgacgcgctcaaccggttccggatcctgtgcgcgacccgcagcggttcacgc
ggcgcggagcacgtcaatgcgctggtggccgcgcacgtcaggcatgcggcgcgcgtgccg
ctcgcggtcggtgcgcactggttcaccgggcggccgatcatggtcacgcgcaacgactat
gcgctcgggctgttcaacggcgacatcggcattgcattgcccgacgcacacggtgtgctg
cgcgtgtggttccggcgcgcggacggcaccgcgcgcgcggtgtcgccggccgcgctgccg
ccgcacgaaacggcgttcgcgctgacggtgcacaagtcgcagggctcggaattcgacgaa
gcggcgctcgtgttgcccgcgtcgttcggccgggtgctcacgcgcgagctggtctatacg
gccgtcacgcgcgcccgcacgcgcgtgcaggtaatcgggccgcggcgcgtgctggcgcag
gcggtcgcgacgcgcacgcagcgcgattcggggctcgcggcccgcgtcgacgaggcgctc
gcccggcgccgcacggaggcttcgcgatga
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