Burkholderia cepacia DDS 7H-2: DM42_507
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Entry
DM42_507 CDS
T03302
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
bced
Burkholderia cepacia DDS 7H-2
Pathway
bced03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bced00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DM42_507 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bced03400
]
DM42_507 (recC)
Enzymes [BR:
bced01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DM42_507 (recC)
DNA repair and recombination proteins [BR:
bced03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DM42_507 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AIO48519
LinkDB
All DBs
Position
1:complement(580540..583878)
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AA seq
1112 aa
AA seq
DB search
MLHLFYSNRHETLADALLEDLAAFPARNGPWAPQQVIVPSAALRRRLELDIAARNGVCAN
VEFTYLAQWLWAQIGRVLTVPARSPFAPDRLVWRCYRLFAQAADGAPWLASPRLAAYLSA
SDDAMRYELAHRVAAVLDHYLTYRPEWLAAWQAGESVLAGDGAPRGISDAARDDERWQAA
LWRALLAELSDSGTPPAHRFLVEARHLDADAVARADWPESVSVFALPTMPPLHVALLREL
SRWIDVRVYALNPCREFWFDIVTAAHAEALDAAGRLDYQEVGHPLLAEWGRQTQAQLHML
HELTESAASGDASRFVENPAPTWLARVQNAILELQPEAETGDTPVERGIEVHVCHSLARQ
LEVLHDRLLAWFDADASLQPSDVLVAVADLAAAGPLIDAVFGTAGAGGARVPYRITGLPP
SQANPVARVLLDWLALPERQVGAPELVEWLRVDAVAARYDIDAAALETVQTWLAAAGARR
GLSPRASDDAAVPAPRHTFSDALARLFLGYAMPEGAAPIGAWLPIEAATGSEAELLGRLA
RFTDDLDGFARRLEESHTPRGWSELFADTLARFFDSGAAYADALAGVRDALDAMLAAMTE
GAPDEALPAAVVRAGLAAALDDPARGGVPWGGVTFSSLTSLRGLPYRVVCLLGMDDGVLP
SLARADEFDLMAVLPKLGDRQRRDDERNLFLDLLLAARDRLLIAYTGRSIRDNAPLPPAA
LVDELLDHLALVTAGPDAAPDAVEAARRAFIVEHPLQPFAAAYFEPGSELVSYDAERATL
ASLLAAEASRDGPREQPFFAQPLPAEPVEPVAFSEFERFWRHPARALLRGRLGIMLADAQ
AELLDTEPFALDFAGSDALAERVLPLLIEAGDGGVYDHALRIADASPELPGGATGAVWRD
QALGSMTQLASNVRRALADGIERRPFSLTVVPKWPDAEQALFGADDAMLAADAVSAPLEL
HGTLNRLTPAGQVIYRYARPSARDYLSAWLAHLVYCAIEPGGPRRTLWFGSGGAFELTPV
AAPLERLAPLAALFRAGRRMPLRFFPRSAWARVSDGEAKAASVWINERVVSEADDPAIAI
AWRGAHPSLDEPFGTLARLVFEPLVEHLKEVA
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgctccatctcttctattcgaaccgtcacgaaacgctggccgacgcgctgctcgaggat
ctggccgcgttcccggcccgcaacggcccgtgggcgccgcaacaggtcatcgtgccgagc
gcggcgctgcgtcgccgcctcgagctcgacatcgccgcgcgcaatggcgtgtgcgcgaac
gtcgagttcacctatctcgcgcagtggctgtgggcgcagatcggccgcgtgctgacggtg
cccgcgcgctcgccgttcgcgcccgaccggctggtgtggcgctgctaccggctgttcgcg
caggcggccgatggtgcgccgtggctcgcatcgccgcggctcgccgcctatctgtcggcg
tccgacgacgcgatgcgttacgagctggcccatcgtgtcgcggccgtgctcgatcactac
ctgacctatcgccccgaatggctggccgcgtggcaggccggcgagtcggtgctcgcgggc
gacggcgcgccgcgcgggatcagcgatgccgcgcgcgacgacgagcgctggcaggccgcg
ctgtggcgcgcgctgctcgccgagctgagcgacagcggcacgccgccggcgcaccgcttc
ctcgtcgaagcgcgccatctcgatgccgatgcggttgcgcgcgccgactggcccgaatcg
gtcagcgtgttcgcgctgccgacgatgccgccgctgcacgtcgcgctgttgcgcgaactg
tcgcgctggatcgacgtgcgcgtctatgcgctgaacccgtgccgcgaattctggttcgac
atcgtgaccgccgcgcatgccgaggcgctcgatgcggccgggcggctcgactatcaggaa
gtcggtcatccgctgctcgccgaatggggcaggcagacacaggcgcaattgcacatgctg
cacgagctgactgaaagcgcggcgtcgggcgatgcgtcgcggttcgtcgagaatcccgcg
cccacctggctcgcgcgcgtgcagaacgcgatcctcgaattgcagccggaggccgaaacc
ggcgacacgccggtcgagcgcgggatcgaggtgcatgtgtgccacagcctcgcgcgccag
ctcgaggtgctgcacgaccggctgctcgcgtggttcgacgccgatgcgagcctgcagccg
tccgacgtgctcgtcgcggtggccgatctggccgcggccgggccgctgatcgacgcggtg
ttcggcacggccggcgccggcggcgcgcgggtgccttaccggatcaccggcctgccgccg
tcgcaggcgaacccggtcgcgcgcgtgctgctcgactggctcgcattgccggagcggcag
gtcggcgcgccggagctggtcgaatggctgcgcgtggatgcggtggccgcgcgctacgac
atcgacgcggccgcgctcgaaacggtgcagacctggctcgcggccgccggcgcgcggcgc
gggctgtcgccgcgcgcgagcgacgacgcggccgtgcccgcgccgcgccatacgttctcc
gatgcgctcgcgcggctctttctcggctatgcgatgcccgaaggcgcggcgccgatcggt
gcgtggttgccgatcgaggcggccacgggcagcgaggccgaactgctcggccggcttgca
cggttcaccgacgatctcgacggcttcgcgcggcggctcgaggagtcgcacacgccgcgc
ggctggagcgaactgttcgccgacacgctcgcgcgcttcttcgattcgggcgccgcgtat
gccgacgcgctggccggcgtgcgcgacgcgctcgatgcgatgctggccgcgatgacggag
ggcgcgcccgacgaggcgttgccggcggccgtcgtccgcgcggggctcgccgcggcgctc
gacgatccggcccgcggcggggtgccgtggggcggcgtcacgttctcgtcgctgacgagc
ttgcgcgggctgccgtatcgcgtcgtctgcctgctcgggatggacgacggcgtgctgccg
agtctcgcgcgcgcggacgaattcgacctgatggccgtgctgccgaagctgggcgaccgg
cagcgccgcgacgacgagcgcaatctgttcctcgacctgctgctggctgcccgcgaccgg
ttgctgatcgcctatacgggccgcagcatccgcgacaatgcgccgttgccgcccgcggcg
ctcgtcgacgagctgctcgatcatctggcgctcgtcacggccgggcccgacgccgcaccg
gatgcggtcgaagccgcgcggcgcgcgttcatcgtcgagcatccgctgcaaccgttcgcg
gccgcgtatttcgagccgggcagcgaactcgtttcgtacgacgccgagcgggccacgctc
gcgtcgctgctggccgccgaagcatcgcgcgatgggccgcgcgagcagccgttcttcgcg
cagccgctgccggccgaaccggtcgagcccgttgcgttcagcgaattcgaacgtttctgg
cggcatccggcacgcgcattgctgcgcggccggctcggcatcatgctggccgacgcgcag
gccgaactgctcgataccgagccgttcgcgctggattttgccggcagcgacgcgctggcc
gagcgtgtgctgccgctgctgatcgaagcgggcgacggcggcgtgtacgatcacgcgctg
cgcatcgcggacgcgagccccgaactgcccggcggcgcgacgggcgcggtgtggcgcgac
caggcgctcggttcgatgacgcagcttgcgtcgaacgtgcgtcgtgcgctggccgacggc
atcgagcggcggccgttctcgctcaccgtcgtgccgaagtggcccgacgccgaacaggcg
ctgttcggcgccgacgacgcgatgctggcggccgacgcggtgagtgcgccgcttgaacta
cacggcacgctgaaccggctgacgccggccgggcaggtcatctatcgctatgcgcggccg
agtgcgcgcgactacctgtccgcgtggctcgcgcatctcgtctactgtgcgatcgagccg
ggcggcccgcgccgcacgctgtggttcggcagcggcggtgcgttcgagctgacgcccgtc
gcggcgccgctcgagcggctcgcgccgcttgccgcgctgtttcgcgcggggcggcgcatg
ccgctgcggtttttcccgcgcagtgcatgggcgcgggtgtccgacggcgaggcgaaggcc
gcgagcgtgtggatcaacgagcgggtcgtgagcgaagccgacgatccggccatcgcgatc
gcgtggcgtggcgcgcatccgtcgctcgacgaaccgttcggcacgctcgcgcggctcgtg
ttcgagccgctcgtcgagcatctgaaggaggtcgcatga
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