Burkholderia cepacia DDS 7H-2: DM42_5281
Help
Entry
DM42_5281 CDS
T03302
Symbol
prpR
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
bced
Burkholderia cepacia DDS 7H-2
Brite
KEGG Orthology (KO) [BR:
bced00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bced03000
]
DM42_5281 (prpR)
Transcription factors [BR:
bced03000
]
Prokaryotic type
Helix-turn-helix
Other families
DM42_5281 (prpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
PAS_4
PAS
AAA_2
AAA
PAS_8
AAA_3
AAA_16
AAA_7
PAS_7
nSTAND3
DUF6262
Motif
Other DBs
NCBI-ProteinID:
AIO44453
LinkDB
All DBs
Position
2:complement(1931352..1933295)
Genome browser
AA seq
647 aa
AA seq
DB search
MRPRIWAMGISRLRDLFREIAGEFDERADVRIVTRAYEDALGAIAEAGTARPDVIVAAGS
NGGFLKTRAQVPVVVVSPTGFDVMQALARARRDATRIALVSAGETPPEVRRFVAAYGLDV
QFASYQSAQEAEACVHDLRDRGIETIVGPGLVTDLAASAGMGAVFLYSHASVRKAVETAL
EVAYATHAEAFRRQRLDTLLQHLRDGVVALDAHGRVEAINERLASALGVEPAAAVGRALV
DLRPELRTLRGEDGDALATVRGVRYVVHRGPLVDRGVTSGSVLTFQESRAVERLDRALRS
QPTTQQFAARYALDDVVGASAPMTRVRELVRRYAKSDATVLVLGESGTGKEMIAQSLHAL
SARRSYPFVAVNCGAFPEALLESELFGYEEGAFTGARRGGKTGLFEAAHRGTLFLDEIGE
MPPSLQSRLLRVLQEREVIRLGSTEPIRIDVRVIAATHRPLLAAVEAGTFRADLYYRLNI
LNVGLPPLRERAADIPALAATLLVQAARREPRLAERVRDTDDALRVLDATQATLARYRWP
GNVRELQNVVERIAVELAEDVDESDSDAACAALAAGALQVIAPELFAAPPDAGGAADDDG
QTLHARRRRAEADEIRAVLDACGGDRDRACAMLGISKTTLWRKLSAK
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtccgcgcatctgggcaatgggcatcagccgcctgcgcgacctgtttcgcgagatc
gccggcgagttcgacgaacgcgccgacgtgcgcatcgtgacgcgcgcctatgaagatgcg
ctcggcgcgatcgccgaggcgggcaccgcgcggcccgacgtgatcgtcgcggccggctcg
aacggcggcttcctgaaaacgcgcgcgcaggtgccggtggtggtcgtgtcgccgaccggc
ttcgacgtgatgcaggcgctcgcgcgcgcgcgacgcgacgcgacgcggatcgcgctcgtc
agcgccggcgaaacgccgcccgaagtgcgtcgcttcgtcgccgcgtacggcctcgacgtg
cagtttgcgtcatatcagtccgcgcaggaagcggaagcctgcgtgcacgacctgcgcgat
cgcggcatcgagacgatcgtcggccccggcctcgtcaccgatctcgcggccagcgccggc
atgggcgcggtgttcctgtattcgcacgcgtcggtgcgcaaggccgtcgagacggcgctc
gaagtcgcgtatgcgacgcacgccgaggcattccgccgccagcggctcgacacgctgctg
cagcatctgcgtgacggcgtggtcgcgctggacgcgcacggccgtgtcgaagcgatcaac
gagcggctcgcgtcggcgctcggggtcgaacccgcggcggccgtcggccgcgcgctcgtc
gacctgcggcccgaactgcgcacgctgcgcggcgaggacggcgacgcgctcgcgaccgtg
cgcggcgtgcgctacgtcgtgcatcgcgggccgctggtcgatcgcggcgtcacgtcgggc
agcgtgctgacgttccaggaatcgcgcgcggtcgaacggctcgatcgcgcgctgcgttcg
caaccgaccacgcagcagttcgcggcccgctatgcgctcgacgacgtggtcggcgcctcg
gcgccgatgacgcgcgtacgcgagctcgtgcgccgctatgcgaaatccgacgcgaccgtg
ctcgtgctcggcgaaagcggcaccggcaaggaaatgattgcgcagagcctgcatgcgctg
tccgcgcggcgcagctatccgttcgtcgcggtcaactgcggcgcgtttccggaagcgctg
ctcgagagcgaactgttcggctatgaggaaggcgcattcaccggcgcgcgacgcggcggc
aagaccggcctgttcgaggccgcgcatcgcggcacgctgtttctcgacgaaatcggcgag
atgccgccgtcgctgcagagccggctgctgcgcgtgctgcaggaacgcgaagtgatccgc
ctcggctcgaccgagccgatccgcatcgacgtgcgcgtgatcgccgcgacgcaccggccg
ctgctcgcggccgtcgaggccggcacgttccgcgcggatctctattaccggctcaacatc
ctgaacgtcggcctgccgccgctgcgcgaacgcgcggccgacattcccgcgctcgcggcg
acactgctcgtgcaggccgcgcggcgcgagccgcgtctcgccgaacgcgtgcgcgacacc
gacgacgcgctgcgcgtgctcgacgcgacgcaagcgacgctcgcgcgctaccgctggccg
ggcaacgtgcgcgagttgcagaacgtggtcgagcggatcgcggtggagctggccgaggac
gtcgacgagagcgattcggacgccgcgtgtgcggcgctcgccgccggcgcgctgcaggtg
atcgcgcccgagctgttcgccgcgccgcccgatgcaggcggcgccgccgacgacgatgga
caaacgctccacgcacgccgccgtcgcgcggaagccgacgagatccgcgcggtactcgac
gcgtgcggcggcgaccgcgatcgcgcctgcgcgatgctcggcatcagcaagacgacgctg
tggcgcaagctgtcggcgaaatag
DBGET
integrated database retrieval system
