Burkholderia cepacia DDS 7H-2: DM42_5739
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Entry
DM42_5739 CDS
T03302
Name
(GenBank) RHS repeat-associated core domain protein
Organism
bced
Burkholderia cepacia DDS 7H-2
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
PAAR_motif
TEN_YD-shell
Minor_tail_Z
Motif
Other DBs
NCBI-ProteinID:
AIO44254
LinkDB
All DBs
Position
2:2450762..2455084
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AA seq
1440 aa
AA seq
DB search
MSQPAARKDDPFTHTTLAGDLLGMGGSLLGGLGIGWALTTLAEGLVFGALGALEIGTGGL
ATPIVLAIGVGVAAYMQGSGLNDKIDEAAKGLGNAISPPEEKGTIQNGSPDVFVNGKPAA
RAADGADMDPVLCSDHPGPQFVAQGSDVVFINDLPAARVDDKTTCDGTISKGSPDVFFGG
GTKTVRDISAARPWVAGLGAAIGIALALCGRGKGNWSDFVKGKLPCLAMNFAAGIFGTWL
GSKMQPSAGHPVNVITGGKILDGSDDTDFVLPGPLPIVWRRFYSSHDDRADGLFGAGWSV
PISVELKVARENGVVASITYWDEQGRDIEFPPVAPGESHFSVPEGIYLICTAGGHYVVET
VDGLYRDFGPARAPASDAETLNLRRLEDRNGNWIEVERAAAGERERPVRLHDSAGRVLTV
HYDPEHPRRVASIELVRGVDGELPEILVRYGYTSAGELATVTDRSGHTGRHFGYEHGRMT
RHTLPGGLQCFYAWNGVGRDARVVRHWTDDGEAYTFDADLAQRSVTITDQIGRVTQWTWN
EDRQPTSHTDAEGHVWQFEWNAMRQLVSTTDPAGHVTRFEYDERGRQTQRIDALGEVERT
EWNGHYDLPVAEIDPTNARWIYRYDTRGNLTMTRDPAGFATEYYRDERGLVHTIRDARGG
YKFLEWNGRAQLTSYTDCSGKVTRFAYDARGALARVTDAAGQATVYETDAMGRVTGIRTA
DGAHQTFRYDAAGRLVEVIDPNQRSTRYELNPRGLLLARTDAADRVVRFGYDDAFRLASL
TNENRETYRFQYDRRDLVSAQIGLDGHKRTYEYDVCGQGTIVRDGQLETRYERDAVGRLT
AKQAAHERCEYLYDEAGRITSAELYAFAARGPSLKNRVSLKYDKRGEVVEEYTPTGWLAH
TYDELGNRVSTTISGERTIDWLHYGSGHVHQIRFDGAAVADIERDDLHREVLRTQGKLTS
HFGYDAVGRRARQTAQRGTAGGELLAKQWQYDAAGDVIQKRDQRYGTTSYRYDPTGRIEH
AAGPGLPSEVFRWDAAANLVSSDHPGGYVEHNRLKMFEDKRFEYDAYGRLVRKLSGHGPA
KELVLEYDDWNQLKTVVTKDRLGIATTHFEYDAFGRRIRKLNGSYASTDFLWDGMRLVQE
TYHDRQGEEALTYLYESNSYVPLARIDQGKAAANDSDVRDAVYYFHNDVSGLPEELTDAG
GELVWQARYKVWGNAVQEEWVARAPQRSTPAWGEVQAVAPVQSHVPRPQNLRFQGQYLDR
ETGLHYNTFRFYDPDIGRFINPDPIGLAGGLNQYRYGPNPLAWIDPWGLTCLSQWSGKRG
REKSMYDLERNGFNVVAEEVTMKVNGKRIRADFVATDNHGNYHVFEAKHGTGRLTKNQSA
SGVFDMASPSNTVDGIGGGVITPSAGKTGQFEIATGNRDIGEVLGERGTSYDATFHVLKY
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagccggccgctcgtaaggatgatccctttacccacacgacgctcgcgggcgac
ctgctcggcatgggcgggtcgctgctgggcggcttggggatcggatgggcgctgaccacg
ctagcggaaggtctcgtgtttggtgcattgggtgcgctcgaaatcggcaccggcgggctg
gcgacgcccatcgtgctggcgatcggtgtcggcgtggctgcatacatgcagggttctggc
ctcaacgacaagatcgacgaggccgcgaaggggctcggcaacgccatttctccgcccgag
gagaaaggcacgatccagaacggctcgcccgatgtgttcgtcaacgggaagccggccgca
cgcgcggccgacggcgcggacatggatccggttctgtgcagcgatcatcccggtccgcaa
ttcgtcgcgcaagggtccgacgtggtgttcatcaacgatctgcccgcggcgcgggtcgac
gacaagaccacctgtgacggcacgatctcgaagggctcgccggatgttttcttcggtggc
ggcacgaagaccgtgcgcgacatcagtgcggcacggccgtgggtcgccggactcggcgcg
gcgatcggtatcgcgcttgcgctatgtggtcgaggcaaggggaactggagcgatttcgtc
aagggcaagctgccgtgtctcgcgatgaacttcgcggccggcatattcggcacatggctc
ggcagcaagatgcagccgtcggccggccatcccgtcaacgtgattaccggcggcaagatt
ctcgacggcagcgacgacacggatttcgtgttgccgggcccgctgcccattgtctggcgg
cgtttttacagcagccatgacgatcgcgccgatggcctgttcggcgccggctggagcgtg
ccgatcagtgtcgagttgaaggtcgcgcgagagaacggcgtcgtcgcgtcgatcacgtac
tgggacgaacaggggcgtgatatcgagtttccgccggtggcgccgggtgagagtcatttc
agcgtgccggaaggcatttacctgatttgtaccgctggcgggcactatgtcgtcgaaacg
gtcgatggtttgtatcgcgatttcggtccggcccgggcaccggcgtcggatgctgaaaca
ctgaaccttcggcggcttgaggaccgaaacggcaattggatcgaggtcgagcgtgcggcc
gccggcgaacgggagcggccggttcggcttcacgatagtgccggccgtgtgctgacggtg
cactacgatccggagcatccgcgacgcgtcgcctcgatcgaactggtacgcggcgtcgat
ggtgagttgcccgagatcctggttcgttacggctatacgagcgcaggcgaactcgcaacg
gtcaccgaccgcagcggccataccgggcggcatttcggttacgaacacggccggatgaca
cggcatacgctgcccggcgggctacagtgcttttacgcgtggaacggcgtcggccgcgac
gcgcgtgtcgtgcgccactggactgacgacggcgaagcgtacacgttcgacgcagacctt
gcgcagcgttcggtgacgatcaccgatcagatcgggcgcgtgacgcaatggacatggaac
gaggatcggcagccgacgagccatacggatgcagaaggtcacgtctggcagttcgaatgg
aatgcgatgcggcaactggtcagcacgaccgatccggccggccatgtcacgcgcttcgaa
tatgacgagcgcgggcggcagacgcagcgcatcgacgcgctcggcgaggtcgagcggacc
gaatggaacgggcactacgatctgcctgttgcggaaatcgatccgaccaatgcgcggtgg
atctatcgctacgacacgcgcggcaacctgacgatgacgcgcgatccggcgggtttcgcg
accgagtattaccgggacgagcgcgggctcgtgcatacgattcgcgatgcgcgtggcggg
tacaagttcctcgaatggaatggtcgggcgcagttgacctcgtataccgattgctccggc
aaggtcacgcggtttgcgtatgacgcacgcggtgcgctcgcgcgggtgacggatgcggcc
gggcaggccaccgtgtacgaaacggatgcgatggggcgagtcacgggaatccggacggcc
gatggtgcgcatcagacgtttcggtacgacgcagcggggcgtctcgttgaggtcatcgat
ccgaatcagcgcagcacgcgttacgagctcaatccgcggggattgttgctggcacgcacg
gatgcggctgatcgtgtcgtgcggttcggctatgacgatgcgttccggttggcgagcttg
accaacgagaaccgtgagacgtatcgctttcagtatgatcgtcgcgatctggtttccgca
cagatcggtctcgatggccacaagcgtacgtacgagtacgacgtgtgcggtcaaggaacg
atcgtacgcgacggccagctcgagacgcgatacgagcgcgatgcggtcggtcggttgacg
gcgaagcaagctgcgcacgagcgttgcgaatacctgtatgacgaggcaggccggattaca
tcggccgagttgtacgcgttcgccgcgcgtgggccatcgttgaagaatcgggtcagcctg
aagtacgacaagcgtggagaagtcgtcgaggaatacacgccgaccggctggctcgcacat
acctacgacgagcttggcaatcgtgtcagcacgacgatttccggcgagcgcacgatcgat
tggctgcattacggttctgggcatgtgcaccagattcgtttcgatggtgccgcggttgcg
gacatcgaacgggatgacctgcatcgcgaggtgctgcggacgcagggcaagctgacgagt
cacttcgggtatgacgcggtggggcgccgtgcgcggcaaaccgcgcagcgaggtacggcg
ggcggcgagttgcttgcgaagcagtggcaatacgatgcggcaggcgacgtgatccagaag
cgcgatcagcgttatggcacgacgagctatcggtatgacccgacggggcgcatcgagcac
gcggcagggccggggttgccgtcggaagtgtttcgctgggatgcggcggcgaacctggtg
tcgagcgatcacccgggcggctacgtcgagcacaaccggctcaagatgttcgaggacaag
cgcttcgagtacgacgcgtatgggcggttggttcgcaagctcagtgggcatgggccggct
aaagaattggtgcttgagtacgacgattggaaccagctcaagacggtcgtgacgaaggac
cggctcgggatcgcgacgacgcatttcgagtacgacgcgttcggccggcggatccggaag
ctcaatggcagttatgcgagtacggatttcctgtgggacggcatgcggttggtgcaggag
acgtatcacgatcgccagggcgaggaagcgctgacgtacttgtacgagtccaatagttat
gtgccacttgcccggatcgatcaagggaaggcggcggctaatgattcggatgtacgggat
gcggtttattacttccacaacgatgtttcggggctgccggaggaactgactgacgctggt
ggcgagctggtttggcaggcgcgctataaggtgtggggcaatgcggtgcaggaggagtgg
gttgcgcgggcgccgcagcggtccacaccggcgtggggcgaagtacaggccgtagcaccg
gtgcagtcgcacgtgcctcgaccgcagaacttgcgctttcaggggcagtatctggaccgc
gagactggcctgcactacaacacgttcaggttctatgatccggacatcggacgcttcatc
aatccggatccgatagggttggcaggcgggttgaatcagtatcgatatgggccgaatccg
ctggcgtggattgacccgtggggcctgacttgcctgagtcaatggagtggaaagcgcggt
cgcgaaaaatcgatgtacgacttggagcgaaacggcttcaacgtcgttgctgaagaggtg
acaatgaaggtgaacggcaagcgtattcgggccgacttcgttgcaacggacaaccacggc
aactatcacgtcttcgaggcgaagcatgggacagggcgtctgaccaaaaatcaaagtgct
tccggtgtatttgatatggcgagtccatcgaataccgttgacggtattggtggtggggta
attacgccgtcagcgggaaaaacgggacagttcgagatcgcaactggcaatagagatata
ggggaagtgcttggtgagcgtggtacttcgtatgatgcaacatttcacgtgctgaaatat
tga
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