Burkholderia cepacia DDS 7H-2: DM42_5825
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Entry
DM42_5825 CDS
T03302
Name
(GenBank) autotransporter-associated beta strand repeat family protein
Organism
bced
Burkholderia cepacia DDS 7H-2
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PATR
Motif
Other DBs
NCBI-ProteinID:
AIO44319
LinkDB
All DBs
Position
2:2555095..2562192
Genome browser
AA seq
2365 aa
AA seq
DB search
MNTARSKKASEPFPRLLLPTGVFLALSGAGIVPAHATCSQAGTTVTCSGVANPLAPSFSS
NLNNINATVNPGASVGVLLGVGGTAMSLTGNNTTLTNNGTIDPSALGSGLGVLSSGAVIG
NAAASSVNVTNNGVMNGSTGVAISGVTGMALSVQSGQGGTSTITNTGSIGSSALVGATLI
GADAPVVAAYGGGTVNMTNSGTISGRVSFGSNSAPGGGNTFTNSGVINGSVSMGANSTNT
FNAVTGSQVNTAGGTGGAFNITVGANTLNVAQTGIVDGGAGGNNTLNLQQGASANGTIAA
NNYINFNHLNVQGGNWTINGASTAQDATLSGGVAIINDNASLGTGTITGNGGALQAGTAA
LNVSNNVSLGVGGLTVQGTTGLTLSGTVSGVGALTKNDGGTLTLSGANNYTGGTNLNAGG
LVIGNNSALGIGTLNVSASASLDTSTNVTLGNTVNLASGSTLSIGGSNSLGLTGAINGSG
GLVKNGAATTTLSGVNTYTGGTTINSGTLALNGAGSLSATGTVNLTGAGATFDVSAASGA
QTIGSLAGAAGTNVNLGVNSLTLGGTGNATYAGTIGGSGSVTLSGTGVQSLTGTNVYTGG
TNLNGGNLVVGSNTALGSGAVNVNGSSTLDATTNVTLANGVNLATGTTLTLGGGTDLGLG
GVISGGGGLVKNGAAALTLNGANNYTGGTTLNAGSLVLGNGSALGTGALTVGGAATLDTN
ANLSVGNAIGLGTGATLTLGGSNALGLSGAISGTGALVKNGASTTTLTGANTYTGGTTIN
AGTLALGAGGSLSSTGTVNLVNAGAALDISAGSAQSIGALSGGVGTSVSLGANALTLGGT
ASGTFSGTIGGTGSLTLAGTGTQTLNGANTYTGGTNLNSGSLVLGNNGALGSGALNVGGA
ATLDTNASLSVGNAVNLGTGAALTLGGSNNLTLGGAISGAGSLVKNGVATTTLTGANTYT
GGTTINAGTLALGAGGSLASTGAMNLAGVGATLDLGGATGGQTLGALSGVAGTNINLGNN
ALTLGGTASGTFSGAIGGTGSLTLAGTGTQTLNGASTYSGGTNLNSGGVVLGNNTALGTG
TVNVGGAATLDTNASLTVANAVNLGTGAALTLGGSNALDLSGAISGAGSLVKNGAATTTL
TGANTYTGGTTINAGTLAVGAGGSLASTGAMNLASAGATLDLSAATGAQTLGALSGVAGT
NLNLGGNALTLGGTASGTFSGAIGGTGSLTLAGTGTQTLSGANTYTGGTTIGGGSTLALG
AGGSLASTGTVNLAGAGATFDLSGASGAQTIGALTGAAGTNVNLGGNGLTLSGNGSNTFG
GAIGGAGGLTLAGSGTQTLTGANTYTGGTTISGGGTLALGAGGSLASTGAVTLAGTGTRL
DLSGATGAQTIGTLAGAGGTSVNLGANALTLNATTNGTFGGAIGGTGGVTVAGTGTQTLT
GANTYTGGTTINGGSTLALGAGGSLASGGAVTLAGAGATFDVSGATAAQTLGTLTGAAGT
NVNLGANALTLNGSGNGTFGGAIGGTGGVTFAGTGTQTLTGANTYTGGTTINGGSTLALG
AGGSLASGSTLNLAGTGATFDVSAASGAQTIGALSGVGGTNVNLGANTLTLNGSGNNTFG
GTIGGTGGVTLAGTGTQTLTGANTYTGGTTIHGGSTLALGAGGSLASTGAVNLAGTGARF
DVSAATGTQTIGALSGAAGTNVNLGANALALNGTGSSTFGGTIDGSGSVTVASGTQVLTG
GNTYTGGTTIAAGGTLQLGNGGTSGSVAGNVVDNGALIVNQSGNVTIASVLSGTGSLTQA
GSGQLTLTGASTLSGPTTVSAGTLAVNGSLGQSTVTVQSGATLTGTGTVGGLVVQNGATA
AATQPGAALNVGGNVTFQPGSTFQVAATPQQSGSLAASGTATLNGGTVQVLANQSAYQPS
TTYTILSASSGVQGAFTQVSANYAFLTPTLSYDPGHVYLRLVQNGTSLPDVATTPNQRSV
ATALGGLGAGNPLYDAVLTTDAPTARRAYGLLDGELQASLKSMLLLDSRYVRDAVTDRVR
QGLAPGSGPLAALSSGGAALCGDNTAGVADPTLPPERRIGSRDGCYGGTPYQPVVWGQAF
GGRSRLAGDGNASTINRSMTGFIAGADMALNDKWRAGLAAGVTHSSLDNDQSSSAAVNSY
YLSLYGGAQYGALGVRGGASYTWYRINSDRYPGFAGFSDHDSAGYNANSAQVFGEVGYAL
PVGPVAIEPFAGLAYVNLHTDGYTETGGAAALRAGGETTHVGFSTLGLRAASQLGSIASG
TFTARGTVGWRHAFGNVRPSSAFTFANGGTSFQVSGVPIARDSAVLEAGIDANVTKRLTL
GLTYSGQYGSGVRDNAILGNILWKF
NT seq
7098 nt
NT seq
+upstream
nt +downstream
nt
atgaatactgcgcgttcgaaaaaggcgagtgaaccgttcccgagactgttgttgcccacg
ggcgttttcctggcactgtccggcgcgggtatcgtgcccgctcatgcgacttgcagccag
gcgggcacgacggtgacctgttccggcgtcgcgaacccgctggcgccgagtttctcgagc
aacctcaacaacatcaacgcgacggtcaaccccggtgcgagcgtcggcgtgctgctcggc
gtcggcggcacggcgatgtcgctgacgggcaacaacaccacgctgaccaacaacggcacg
atcgacccgtcggcgctcggctcggggctcggcgtgctgtcgagcggcgcggtgatcggc
aacgcggcggcgagctcggtcaacgtcaccaacaacggcgtgatgaacggctcgaccggc
gtggcgatcagcggcgtgacgggcatggcgctgtcggtccagagcggccagggcggcacg
tcgaccattacgaacaccggttcgatcggctcttccgcgctggtcggtgcgacgctgatc
ggcgccgatgcgccggtggtcgccgcctacggcggcggcacggtcaacatgacgaacagc
gggacgatcagcggccgcgtgtcgttcggctcgaacagcgcgcccgggggcggcaatacg
ttcaccaactcgggcgtgatcaacggcagcgtgtcgatgggcgcgaacagcacgaacacg
ttcaatgccgtgacgggctcgcaggtcaacacggccggcggcaccgggggcgcgttcaac
atcacggtcggggcgaacacgctcaacgtcgcgcagacgggcatcgtcgacggcggcgcg
ggcggcaacaacacgctcaacctgcagcagggcgcttccgcgaacggcacgatcgcggcc
aacaactacatcaacttcaatcacctgaacgtccagggcggcaactggacgatcaacggc
gcgtccaccgcgcaggacgcgacgctgagcggcggcgtggcgatcatcaacgacaacgcg
tcgctcggcaccggcaccatcaccgggaacggcggtgcgttgcaggcgggcacggcggcg
ctcaacgtctctaacaacgtgtcgctcggcgtggggggcctgacggtgcagggcacgacc
gggctgacgctgtccggtacggtgtcgggtgtcggtgcgctgacgaagaacgacggcggc
acgctgacgctgtccggcgcgaacaactacacgggcggcaccaacctgaacgccggcggc
ctggtgatcggcaacaattcggcgctcggcatcggcacgctgaacgtgagcgcgtcggcg
tcgctcgatacgagcacgaacgtgacgctcggcaacacggtcaatctcgcctccggctcg
acgctgtcgatcggcggcagcaacagtctcgggctgaccggcgcgatcaacggaagcggc
ggcctcgtgaagaacggcgcggcgaccacgacgctgagcggcgtcaatacgtatacgggc
ggcacgaccatcaacagcggtacgctcgcgctgaatggggccggcagtctgtcggcgacc
ggcacggtcaacctgaccggtgcgggtgcaacgttcgacgtgagcgctgcgtcgggcgcg
cagacgatcggctcgctggccggcgcggccggcacgaacgtgaacctcggcgtcaattcg
ctgacgctcggcggcaccggcaatgcgacctatgccggcacgatcggcgggtcgggcagc
gtgacgctgtcgggtaccggtgtgcaatcgctgacgggtacgaacgtatacacgggcggc
accaacctgaacggcggcaacctcgtcgtcggcagcaatacggcgctcggcagcggcgcg
gtgaacgtgaacggctcgtcgacgctcgacgcgacgaccaacgtgaccctggcaaacggc
gtcaatctcgcgacgggcaccacgctgacgctcggcggcggcaccgatctcggcctcggc
ggcgtgatttccggtggcggcggtctcgtgaagaacggcgcggccgcgctgacgctgaac
ggcgcgaacaattacaccggtggcacgacgctgaacgcaggcagcctcgtgctcggcaac
ggctccgcactgggcaccggtgcgctgaccgttggcggcgcggcgacgctcgatacgaat
gcgaacctgtcggtcggcaatgcgatcggtctcggcacgggcgcgacgctgacgctcggc
ggcagcaacgcactcggattgagtggcgcgatttccggtacgggcgcgctggtgaagaac
ggcgcgtcgaccacgacgctgacgggggcgaacacctacaccggcggcacgacgatcaat
gccggcacgctcgcgctcggcgcgggcggcagcctgtcgtccacgggtacggtgaacctg
gtcaatgcgggagccgcgctcgacatcagcgcgggcagcgcgcagtcgatcggcgcgctg
tcgggcggcgtcggcacgagcgtgagcctcggcgccaacgcgctgacgctgggcgggacc
gcgagcggcacgttcagcggcacgatcggcggcaccggcagcctgacgctggcgggtacc
ggcacgcagacgttgaatggcgcaaatacctataccggcggcacgaatctcaatagcggc
agcctggtactcggcaacaacggggcgctcggctccggcgcgctgaacgtcggcggggcg
gcgacgctcgatacgaatgcgagcctgtcggtcggcaatgcggtcaatctcggcacgggc
gccgcgctcacgctcggcggcagcaacaacctcacgctgggcggcgcgatttccggcgcg
ggcagcctcgtgaagaacggcgtggccaccaccacgctgaccggcgcgaatacctacacg
ggcggcacgacgatcaacgcggggacgctggcgctcggcgcgggcggcagtcttgcatcg
accggtgcgatgaacctcgcgggcgtcggcgcgacgctggatctgggcggtgcgacgggc
ggccaaacgctcggcgcgctgtcgggtgtcgcgggaacaaacatcaacctcgggaacaat
gcactgacgctgggcgggaccgccagcggcacgttcagcggtgcgatcggcggtacgggc
agcctgacgctcgcaggcaccggcacgcagacgctgaacggcgcgagcacctattcgggc
ggcacgaacctcaatagcggtggcgtggtgctcggcaacaatacggcgctgggcaccggc
acggtgaacgtgggcggcgcggcgacgctcgatacgaacgcgagcctgacggtggccaat
gcggtcaatctcggcacgggtgcggcgctcaccttgggcggcagcaatgcgctcgacctg
agcggtgcgatttccggtgcgggcagcctcgtgaagaacggcgcggcgacgaccacgctg
acgggcgcgaacacgtacacgggcggcaccacgatcaacgccggcacgctggcggtgggc
gcgggcggaagcctcgcgtcgaccggagcgatgaatctcgcgagtgccggcgcgacgctc
gatctgagcgccgcgacgggcgcacaaacgctcggcgcattgtcgggcgtcgcgggcacg
aacctcaacctcggtggcaacgcactgacgctgggcgggaccgccagcggcacgttcagc
ggtgcgatcggcggcacgggcagcctgacgctcgcgggcaccggcacgcagacgctgtcc
ggcgcgaacacctatacgggcggcacgacgatcggcgggggcagcacgctggcgctcggc
gcgggcggcagccttgcgtcgaccggcacggtgaatctggccggggccggggcgacgttc
gacctgagcggcgcatcgggcgcgcagacgatcggcgcactgaccggtgcggccggcacg
aacgtgaacctcggcggcaacgggctgacgctgagcggcaacggcagcaacacgttcggc
ggcgcgatcggcggcgccggcggcctgacgctcgccggcagcggtacgcagacgctgacg
ggcgcgaacacgtataccggcggcacgacgatcagcggcggcggcacgctggcgctgggt
gcgggcggcagcctcgcgtcgaccggcgcggtgaccctcgccggcacgggtacgaggctc
gatctgagtggcgcgacgggcgcgcagacgatcggcacgctggcgggtgcgggcggcacg
agcgtgaatctgggcgcgaatgcgctgacgctgaatgccaccaccaacggtacgttcggc
ggtgcgatcggcgggacgggcggtgtgacggtcgccggcacgggcacgcaaacgctgacg
ggcgcgaacacgtataccggcggcacgacgatcaacggcggcagcacgctcgcgctcggt
gcgggcggcagcctcgcgtcggggggcgccgtgactctcgcgggcgcgggcgcgacgttc
gacgtgagcggcgcgacggccgcccagacgctcggcacgctgaccggcgcggccggcacg
aacgtgaatctcggcgcgaatgcgctgacgttgaacggcagcggcaacggtacgttcggc
ggtgcgatcggcgggacgggcggcgtgacgttcgccggcacgggcacgcaaacgctgacg
ggcgcgaacacatataccggcggcacgacgatcaacggcggcagcacgcttgcgctggga
gccggtggcagtctcgcgtccggtagcaccctgaatctcgcgggcacgggtgcgacgttc
gacgtgagcgctgcgagcggcgcgcaaacgatcggtgcgctgtcgggggtgggcggcacg
aacgtgaatctcggcgcgaatacgctgacattgaacggcagcggcaacaacacgttcggt
ggcacgatcggcgggacggggggcgtgacgctggcgggcaccggcacgcagacgctgacg
ggggcgaacacgtacacgggcggcacgacgatccatggcggcagcacgcttgcactcggc
gcgggaggtagcctcgcgtcgacgggcgcggtgaatcttgcgggcaccggtgcgaggttc
gatgtgagcgccgcgaccggtacgcaaacgatcggtgcgctgtcgggcgcggccggcacg
aacgtgaatctcggcgcgaatgcgctggcgctgaacggcaccggcagcagtacgttcggc
ggcaccatcgatggctcgggcagcgtgacggtggcgagcggcacgcaggtgctgaccggc
ggcaacacgtacacgggcggcaccacgatcgccgccggcggcacgctgcaactcggcaac
ggcggcacgtcgggcagcgtggccggcaacgtcgtcgacaacggtgcgctgatcgtcaat
caatccggcaatgtgacgatcgcgagcgtgctgtccggcaccggctccctcacccaggcc
ggcagcggacaactgaccctaaccggcgcgagcacactgagcgggccgaccacggtcagt
gcgggcacccttgccgtcaacggttcgctcggccagtcgaccgtcaccgtgcagagcggc
gcgacgctgaccggcaccggcacggtcggcggcctcgtcgtgcagaacggcgcgacggcg
gctgccacgcaaccgggcgcggcgctgaacgtgggcggcaacgtcacgttccagccgggt
tcgacgttccaggtcgccgccacgccgcagcaaagcggcagcctcgcggcgagcggcacg
gcgacgctgaacggcggcaccgtgcaggtgctggcgaaccagagcgcttaccagccgagc
acgacgtacacgatcctcagcgcgtcgtcgggcgtgcagggcgcgttcacccaggtgagc
gcgaactacgcgttcctgacgccgaccctcagctacgacccgggccacgtgtacctgcga
ctggttcagaacggcacgtcgctgcccgacgtcgcgacgacgccgaaccagcgctcggtc
gcgaccgcgctgggcgggctcggcgccggcaatccgctgtacgacgctgtgctgacgacc
gacgcgcccaccgcgcgccgcgcgtacgggctgctcgacggcgaactgcaggcgagcctg
aagagcatgctgctgctcgacagccgctatgtacgcgacgcggtgaccgatcgtgtccgc
cagggtctcgcgcccggatcgggcccgctcgcggccctgtcgtcgggcggcgccgcgctg
tgcggcgacaacacggccggcgtggccgacccgacgctgccgccggaacgccggatcggc
tcgcgcgacgggtgctacggcgggacgccgtatcagccggtcgtctgggggcaggcgttc
ggcggccgcagccggcttgccggcgacggcaacgcgtcgacgatcaaccgcagcatgacg
ggcttcatcgccggcgccgacatggcgctcaacgacaagtggcgcgcgggtctggcggcc
ggtgtcacgcacagctcgctcgacaacgaccagagttcgtcggcggcggtgaacagctac
tacctgtcgctgtacggcggcgcgcagtacggcgcgctcggcgtgcgcggcggcgcgtcg
tacacgtggtaccgcatcaacagcgaccgctatccgggcttcgcgggcttctccgatcac
gactcggccggctacaacgcgaattcggcgcaggtgttcggcgaagtcggctacgcgctg
ccggtcgggccggtcgcgatcgagccgttcgcgggcctcgcgtacgtgaacctgcatacc
gacggctatacggaaaccggcggcgcggccgcgctgcgcgccggcggcgagacgacccac
gtcggcttctcgacgctcggcctgcgtgcggcgtcgcagctcggctcgatcgcgagcggc
acgttcaccgcgcgcgggacggtcggctggcgacatgcgttcggcaacgtgcggccgtcg
tcggcgttcacgttcgcgaatggcggcacgtcgttccaggtgtcgggcgtgccgattgct
cgcgacagcgcggtactcgaagccggcatcgacgcgaacgtcacgaagcgcctgacgctc
ggcctcacgtacagcggccagtatggcagcggcgtgcgcgacaacgcgatcctcggcaac
atcctgtggaaattctga
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