Burkholderia cepacia DDS 7H-2: DM42_5871
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Entry
DM42_5871 CDS
T03302
Name
(GenBank) squalene/phytoene synthase family protein
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
bced
Burkholderia cepacia DDS 7H-2
Pathway
bced00100
Steroid biosynthesis
bced00909
Sesquiterpenoid and triterpenoid biosynthesis
bced01100
Metabolic pathways
bced01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
bced00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
DM42_5871
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
DM42_5871
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bced01006
]
DM42_5871
Enzymes [BR:
bced01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
DM42_5871
Prenyltransferases [BR:
bced01006
]
Terpene biosynthesis
Squalene/phytoene synthase
DM42_5871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
AIO44921
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All DBs
Position
2:2617718..2618788
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AA seq
356 aa
AA seq
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MTTDTHSADLLGNLLKNVSRSFYLSLCVLPDGMREPVGLAYLIARAADTIADTALVAPDR
RVALLTQLRENVEQLDDGVSLSHALEDVTRMQTDSHEHVLLGSIPPMLALLRAQTDADSA
AIRKVVATLTSGMEFDLRTFPDEQSGQVASLPTYDMLDRYTYLVAGCVGEFWTDMTGAHT
RAARSWDFQDMFDKGIQFGKALQMTNILRDCAKDLPIGRCYLPDDVLAAHGLGVADLMRP
GASTRARGVLIDLLRVALDQYRDACLYTLAIPRRFVRLRLASLWPILIGLETLELLAGQD
AWLDPAAPAKVPRKRVYRIMVSSLLIIGSNVAIETRIARLIASVDTLAQIKAPAAC
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgatacccattctgcagatctgctcggcaacctcctcaagaacgtttcgcgc
tccttttacctgtcgctgtgcgtgctgcctgacggcatgcgcgaaccggtcgggctcgca
tacctgatcgcgcgcgcggccgataccatcgcggacaccgcacttgtcgccccggaccgt
cgtgtggcgctgctgacgcaattgcgcgagaacgtcgagcagcttgacgacggtgtctca
ctgtcccatgcactcgaggacgtgacgcggatgcagacggattcccacgaacacgtgctg
ctcggctcgataccgccgatgctcgcgctgctgcgcgcgcagacggacgccgacagcgca
gcgatccgcaaggtcgtcgcaacactaacttccggcatggaattcgacctgcgcacgttt
ccggacgaacagtcggggcaggtcgcttcactgccgacgtacgacatgctcgaccgctac
acctacctggtcgcgggttgcgtcggggaattctggacggatatgacgggtgcgcacacg
cgtgctgcacgcagctgggacttccaggacatgtttgataaagggatccagttcggcaag
gcgctgcagatgaccaacattttgcgcgactgcgcgaaggatctccctattggccgttgc
tacctgccggacgacgtgctggccgcgcacgggctcggcgtggccgatctgatgcggccg
ggggcgtcgacgcgtgcgcgtggcgtgctgatcgacctgttgcgcgtagcgctcgaccag
tatcgcgatgcgtgtctgtatacactcgcgatcccgcgtcgcttcgtgcggttgcggctc
gcgagcctgtggccgattcttatcggcctcgagacgcttgagctattggccggccaagac
gcgtggctcgacccggcggcgccggccaaggtaccgagaaagcgcgtctaccggatcatg
gtgtcgtcgctgttgatcatcggttcgaacgtggcgattgagacacggatagcacggctc
attgcgtccgtcgatacgttggctcagatcaaggcaccggctgcctgctaa
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