KEGG   Burkholderia cepacia DDS 7H-2: DM42_5945
Entry
DM42_5945         CDS       T03302                                 
Name
(GenBank) type III secretion outer membrane pore, YscC/HrcC family
  KO
K03219  type III secretion protein C
Organism
bced  Burkholderia cepacia DDS 7H-2
Pathway
bced03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:bced00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    DM42_5945
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bced02044]
    DM42_5945
Secretion system [BR:bced02044]
 Type III secretion system
  Type III secretion core apparatus
   DM42_5945
SSDB
Motif
Pfam: Secretin Secretin_N T3S_SPI-1_N0 type_II_gspD_N0
Other DBs
NCBI-ProteinID: AIO45094
LinkDB
Position
2:2710223..2712268
AA seq 681 aa
MRRRVASIRFQPRSLQRAALAVCATALLTASLCMAPAQHARAADLRWRNKPFTIVANGKK
IGDFIRELASSQGVTAVVDPKVDGVISGRFSGTPQQTLDTICSTYGLTWYYDGSFLYVDP
ADQSQTQMIPIPPNASGEIGRALQAMQIPDKRYTLVINDRANSVYVAGPRRYVELVRQAV
GSVGDPSANGAHADIRAFRLKYGWASDFTINRSGKEVTVPGVATILRRLFGKGGGTTAAP
SSTPLGQAARQVKLGSGLTIAVPRLDFPDISGGPRQGGYGGADGSMGGGFSPFSNNGGGD
TLPQIVADPAINAVIVRDLPENMYRYQSLIGQLDERPRIVEINVTIIDINEDSLDSLGID
WRLHTTHGDVQIGNGQNALNGNTQYNGAGNPPLTFGIGTSETGQTGAFMPTGIALTASIG
GSLRNYLLTRVNALAQKGQAQLRSKPKVLALDNTEAILENLTQFYVQVPGYQDSSLYSVT
TGTSIKVTPMIVDEAIRNAAAVSGNPQSVMMSIDIQDGNIVPGQAVSNVPVIQQRNIVTK
TMIDEGKSLLIAGFNDDEVRLNKSGVPWLSDIPLIGNLFKYTDKSGNHMERFYLLTPRVV
TSASMYAPDGSPVNPGVDGPANQEGMSMYRPPDNDVTVPLTPKPLPGTKFGPPALPPPKD
TAASQPAATTAGVVTHVDEHH
NT seq 2046 nt   +upstreamnt  +downstreamnt
atgcgtcgacgcgtcgcctcgatccggtttcaaccgcgcagcctgcaacgggccgcgctt
gccgtgtgcgcgaccgcgctgctcacggcgtcgctgtgcatggcacccgcgcagcatgcg
cgcgccgcggacctgcgctggcgcaacaagccgttcacgatcgtcgcgaacggcaagaag
atcggcgacttcatccgcgagctcgcgtcgtcgcagggcgtgacggcggtggtcgacccg
aaggtcgacggcgtgatcagcggccgcttctccggcacgccgcagcagacgctcgacacg
atctgctcgacctacgggctcacgtggtactacgacggctcgttcctgtacgtcgatccg
gccgaccagtcgcagacgcagatgatcccgattccgccgaatgcgtccggcgaaatcggc
cgcgcgctgcaggcgatgcagattccggacaagcgctacacgctggtgatcaacgatcgc
gcgaacagcgtgtatgtggccggcccgcgccgctatgtcgagctcgtacggcaggcggtc
ggctcggttggcgatccgtcggcgaacggcgcgcatgcggacatccgcgcgttccggctg
aaatacggctgggcgtcggacttcacgatcaaccgctcgggcaaggaagtgacggtgccg
ggcgtcgcgacgatcctgcgccggctgttcggcaagggcggcggcacgaccgcggcgccg
tccagcacgccgctcgggcaggccgcgcgccaggtgaagctcggctcggggctgacgatc
gcggtgccgcggctcgactttcccgacatttccggcggcccgcggcagggcggttatggc
ggggcggacggcagcatgggcggcggcttctcgccgttctcgaacaacggcggcggcgac
acgctgccgcagatcgtcgccgacccggcgatcaacgcggtgatcgtgcgcgacctgccg
gagaacatgtaccgctaccagtcgctgatcggccagctcgacgagcggccgcgcatcgtc
gagatcaacgtgacgatcatcgacatcaacgaggattcgctcgacagcctcgggatcgac
tggcgcctgcacacgacgcacggcgacgtgcagatcggcaacggccagaacgcgctgaac
ggcaacacgcagtacaacggcgccggcaatccgccgctgacgttcggcatcggcacgtcg
gaaaccgggcagacgggcgccttcatgccgaccggcatcgcgctgaccgcgtcgatcggc
gggtcgctgcgcaactacctgctcacgcgcgtgaacgcgctcgcgcagaaaggccaggcg
caactgcgatcgaagccgaaggtgcttgcgctcgacaacaccgaggcgatcctcgagaac
ctcacgcagttctacgtgcaggtgccgggctatcaggattcgtcgctgtacagcgtgacg
accggcaccagcatcaaggtgacgccgatgatcgtcgacgaggcgatccgcaacgcggcg
gccgtgtcgggcaacccgcagagcgtgatgatgtcgatcgacatccaggacggcaacatc
gtgccggggcaggcggtgtcgaatgtgccggtgatccagcagcgcaacatcgtcaccaag
acgatgatcgacgaaggcaagagcctcctgatcgccggtttcaacgacgacgaggtgcgg
ctgaacaagagcggcgtgccctggctgtccgacatcccgctgatcggcaacctgttcaag
tacaccgacaagtcgggcaaccacatggagcggttctacctgctgacgccgcgggtcgtg
acgagcgcgtcgatgtatgcgccggacggctcgccggtgaatccgggcgtcgacggtccg
gcgaaccaggaagggatgtcgatgtatcgcccgccggacaacgacgtcacggtgccgctg
acgccgaagccgctgcccggcacgaaattcggtccgcccgcgttgccgccgccgaaggat
acggcggcgtcgcagcccgcggcgacgaccgcaggagtggtcacgcatgtcgacgagcat
cattga

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