KEGG   Burkholderia cepacia DDS 7H-2: DM42_5946
Entry
DM42_5946         CDS       T03302                                 
Name
(GenBank) type III secretion apparatus protein, YscD/HrpQ family
  KO
K03220  type III secretion protein D
Organism
bced  Burkholderia cepacia DDS 7H-2
Brite
KEGG Orthology (KO) [BR:bced00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bced02044]
    DM42_5946
Secretion system [BR:bced02044]
 Type III secretion system
  Type III secretion core apparatus
   DM42_5946
SSDB
Motif
Pfam: Yop-YscD_cpl Y4YQ_C T2SSB BON T2SSC
Other DBs
NCBI-ProteinID: AIO45518
LinkDB
Position
2:2712249..2713592
AA seq 447 aa
MSTSIIDPHGDGALPGGAAGGAGSAAALASPWNLCFLSGPMYGRTMSLARGANWVGTAAD
CEVILPDREIGAKQVCLQVGALAVTVQNHGGDAGAPVLFNDEPLGTGRRSLTPNDVVTVG
SIRLGIARHAQASVAVPDETDAPDAAREAAWLGWLTGGLRRLGSRRLVIALVALWVGVLL
GALGYGFVAWSGRLPWQHESVLARTHRLQQLLHAYPELAVAPRDDGVIVSGYVSDPAARE
RVAQIVAGVDNAALGNIYVVSDLVATAQTYFSDTALTVTYLGRGRIELTGTAARAQIEPR
IRNYMKDARPALEVVDHVRDADAAAPRTATTLGGTAGIPEITTVFAGDGDQRYIETVDGS
RYFEGARLKEGATVVSIGPDEVVFERNGQRITMPLGGPSTRAPEQAPAPPVAPLASGAAA
GVAQPVPGPTLLPREPAAGVSTKEAAH
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgtcgacgagcatcattgatccgcacggcgacggcgcattgcccggcggcgcggcgggc
ggggccggctcggccgccgcgctcgcgtcgccgtggaacctgtgcttcctgagcgggccg
atgtacggccgcacgatgtcgctcgcgcgcggcgcgaactgggtcggcacggcggccgac
tgcgaggtgatcctgcccgatcgcgagatcggcgcgaaacaggtgtgcctgcaggtcggc
gcgctcgcggtgacggtgcagaaccacggcggcgacgccggcgcgccggtgctgttcaac
gacgagccgctcggcaccggccgccgctcgttgacgccgaacgacgtcgtgacggtcggc
tcgatccggctcggcatcgcacggcatgcgcaggcgagcgtcgcggtgcccgacgaaacc
gatgcgccggacgccgcgcgcgaagccgcgtggctcggctggctcacgggcgggctacgg
cggctgggcagccggcggctcgtgatcgcgctggtcgcgctgtgggtcggcgtgctgctc
ggcgcgctcggctacggcttcgtcgcgtggtcggggcggctgccgtggcagcacgaatcg
gtgctcgcgcgcacgcaccggctgcagcaactgctgcacgcgtatccggagctggcggtc
gcgccgcgcgacgacggcgtgatcgtgtcgggctacgtgagcgacccggccgcgcgcgag
cgcgtcgcgcagatcgtcgcgggcgtcgacaacgcggcgctcggcaacatctacgtggtc
agcgatctcgtggcgaccgcgcagacctatttcagcgacacggcgctgacggtcacgtat
ctcggccgcggccggatcgagctgacgggcacggccgcgcgcgcgcagatcgagccgcgc
atccgcaactacatgaaggacgcgcgcccggcgctcgaggtggtcgatcacgtgcgcgat
gccgatgcggccgcgccgcgcacggcgacgacgctcggcggcacggcgggcattccggag
atcacgaccgtgttcgccggcgacggcgaccagcgctacatcgagacggtcgacggcagc
cgctatttcgaaggcgcgcggctgaaggagggcgcgaccgtcgtgtcgatcggcccggac
gaggtcgtgttcgaacgcaacggccagcgcatcacgatgccgctcggcggcccgtcgacg
cgtgcgcccgagcaggcgccggcgccgcccgtggcgccgctcgcgagcggtgcggcggcg
ggcgtcgcgcagccggtgccggggccgacgctgttgccgcgcgagccggcggccggtgta
tcgacgaaggaggcggcgcactag

DBGET integrated database retrieval system